| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1682 |
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| Symbol | |
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| ID | 5205609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2080514 |
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| End bp | 2081725 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599907 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001280572 |
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| Protein GI | 148653479 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000210752 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT TAACCAAAAT GACCGAGATT GAAGACTTGC GCCGAGTAGC TGAGCGCAAA
GTACCGCGCA TGTTTTATGA TTATGTCGAC TCAGGATCAT GGACGCAGAC CACTTATCGT
AACAACGAAA CCGACTTTGA CCGTATCAAA TTACGCCAGC GCGTGTTGGT CGATATGGAC
AACCGCAGCT TAGCAACTCA GATGATCGGT GAAGACGTAA AAATGCCTAT TGCCATTGCC
CCTACCGGCT TTACCGGTAT GATGTGGGCC AATGGTGAGA TGCATGCCGC TAAAGCCGCC
AAAGACTTTG GGGTGCCTTT TTCACTGTCC ACCATGAGTA TCAACTCTAT TGAAGATGTG
GCCGAGTACA CCAACCATCC TTTTTGGTTT CAGCTGTATG TGATGCGTGA TAAAGACTTC
ATGGCCAATC TGATTCGCCG CGCTAAGGAG GCCAACTGTT CAGCCTTAAT CTTGACTGCG
GACTTACAGG TACTTGGTCA GCGTCACAAA GACATCAAAA ATGGTCTATC TGCACCACCA
AAACCCACTT TGGCCAATAT CTTAAACCTA ATGACCAAGC CTGAATGGTG CTTTAATATG
CTGGGCGCCA AGCGCCGTAC ATTCGGCAAC ATCGTGGGCC ATGCTAAGGG CGTCGGCGAC
TTGTCGTCAT TGTCTTCTTG GACCGCTGAG CAGTTCGATC CTAGCCTAAG CTGGGATGAT
GTTGCCCGTA TTAAAGACAT GTGGGGCGGC AAGCTGATCA TCAAGGGTAT CATGGAGCCT
GAAGATGCCA TTTTGGCTGC CCGCAGTGGC GCAGATGCTA TGGTTATCTC AAACCACGGT
GGCCGCCAAT TAGATGGTGC GCCCTCCTCT ATTGCCTGCT TGTCTGAAGT GGTGCAAGCG
GTACAAGCTG AGAAAAGCGA TATTGAAGTG TGGCTAGATA GTGGTATCCG CTCAGGTCAA
GATGTACTAA AAGCCATTGC TTTAGGCGCT AAGGGCACCA TGGTTGGGCG CGCTTTCTTA
TATGGCTTGG GTGCTTATGG TGAAGATGGC GTGCGCCGCG CATTAGAGAT TTTATACAAA
GAGTGCGATA TCACTATGGC ATTTTGTGGT AGAACCAACA TCAGCGACGT CACAGATGAC
ATCTTAGTCA AAGGTACGTA TGAGTATCTT AAGACCTCTA TTCCGCAAGT GGCACCCATT
CGTTGGGGCT AA
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| Protein sequence | MKDLTKMTEI EDLRRVAERK VPRMFYDYVD SGSWTQTTYR NNETDFDRIK LRQRVLVDMD
NRSLATQMIG EDVKMPIAIA PTGFTGMMWA NGEMHAAKAA KDFGVPFSLS TMSINSIEDV
AEYTNHPFWF QLYVMRDKDF MANLIRRAKE ANCSALILTA DLQVLGQRHK DIKNGLSAPP
KPTLANILNL MTKPEWCFNM LGAKRRTFGN IVGHAKGVGD LSSLSSWTAE QFDPSLSWDD
VARIKDMWGG KLIIKGIMEP EDAILAARSG ADAMVISNHG GRQLDGAPSS IACLSEVVQA
VQAEKSDIEV WLDSGIRSGQ DVLKAIALGA KGTMVGRAFL YGLGAYGEDG VRRALEILYK
ECDITMAFCG RTNISDVTDD ILVKGTYEYL KTSIPQVAPI RWG
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