Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1669 |
Symbol | |
ID | 5206929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2063454 |
End bp | 2064560 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640599894 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001280559 |
Protein GI | 148653466 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000382916 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC ACAGGTAAGT ACTTTTCTGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGAGAGTAT TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAG CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC TTAGGCTGGA TACCTTTTAA AAAGTCTGCT ATCAAGTATC TACGTAGCAG ACAAACGGGG AAGAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA GACAGCCGTA ACCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT GGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC CTCAAACGGT GACAAGCTGA CAACCAAACA AACGCAAAAG TGGGCTAAAA AGCTTGCAAT AGCTCAAAGA GCGAAAAACA AACAGCGAGT CAAAGCAATC CATGCCAAGA TCAAAAACTC AAGATTAGAT GCCATACACA AATTCACCAC CCAATTAGTT AAGGATAATG CCTTAATTGT GGTTGGTGAT GTTAAATCCC GATCATTCAC CAATTCGATG ACCAACCTAG CTAAATCGAC ATACGATGCA GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGT GCTGTCTTAA AATAAGTGAT AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT CTTGTAGAAG GAATCCCCTC GGTTTAG
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Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLRSRQTG KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS GKGSVGIDLG LKQSATTSNG DKLTTKQTQK WAKKLAIAQR AKNKQRVKAI HAKIKNSRLD AIHKFTTQLV KDNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL EIVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR LVEGIPSV
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