Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1649 |
Symbol | |
ID | 5205657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2037904 |
End bp | 2038632 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599872 |
Product | Smr protein/MutS2 |
Protein accession | YP_001280539 |
Protein GI | 148653446 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.369451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAATT CATTATTTTC AAAAGAGATG CAAGACCAGC TCAAAGAGCT AAAAAGCGAA CTTAGCAAAG GCCGTGCTAC CTCTCCTAGC GATCCTGAGA ATGAAAAACC CACTGATCCT GTTACCCTAC CGACCAAAAA ACAGGTCGAA AAAACCGTTA AGCAATTAGA CAGCGCTCAT GTTGATGATG ACAAAGTGCT GTTTATGCAG GCCATGGCAG GTGTTCAGCC CATCAAAGAC AACAACACCT TATCGGATGT GGCCAAGCCC AAATCAACCA AACCTGACGC AGCCACGTTA TCAAAGCGTG CAGCGGCTCA AGGCGCTGAC TCTGAAAAGT TAGAAGCGGG ATTGTCAGAC ATGCAGGCAC TATTAAACCC TGTGAGCGGC GACTCTTATC TTATTTATAA AACCCCAACG CTACAAAACA AAGTCTTCAC TCAGTTAAAA CAAGGCAAAT TACGCTGGTA TGATGCTGTA GACGTGCACG GCTGTACTAT TGATGAGGCG CGTGAAGCCA TGACTACCTT GATTACGCAG GCACGTAGCA ATAATGAATC TGTGGTAAAA ATCGTCCATG GTAAAGGTAC TGATGCGGTT CTAAAAACTT GCGTTAACGG CTGGCTACGC CAATTACCCG AAGTTCTAGG CTTTTGCTCA GCTCCGCCAA AAGATGGTGG CAATGGCGCT GTACTGGTGT TATTAAAGAA AAATAAATCA CAAGACTAA
|
Protein sequence | MANSLFSKEM QDQLKELKSE LSKGRATSPS DPENEKPTDP VTLPTKKQVE KTVKQLDSAH VDDDKVLFMQ AMAGVQPIKD NNTLSDVAKP KSTKPDAATL SKRAAAQGAD SEKLEAGLSD MQALLNPVSG DSYLIYKTPT LQNKVFTQLK QGKLRWYDAV DVHGCTIDEA REAMTTLITQ ARSNNESVVK IVHGKGTDAV LKTCVNGWLR QLPEVLGFCS APPKDGGNGA VLVLLKKNKS QD
|
| |