Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1629 |
Symbol | |
ID | 5205097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2015474 |
End bp | 2016700 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599851 |
Product | cysteine desulfurase IscS |
Protein accession | YP_001280520 |
Protein GI | 148653427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000331255 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000285871 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAACT TGAACCGCCC TATCTATCTT GACTATGCAG CAACTACCCC TGTAGATCCG CAAGTGGCCA AAAAAATGAC CGAGTATATG ACCTTTGATG GCATGTTCGG TAACCCCGCT TCTCGATCAC ATGGTTATGG TTGGCAAGCA GAGGAAGCTG TAGAAAATGC GCGTCAGCAA ATCGCTGATC TGGTTAATGC TGATCCTCGT GAAATCGTAT TCACCTCAGG GGCTACTGAA TCAGACAACT TGGCCATTAA AGGCGCCGCT CATTTCTATG CAGGCCGCGG TAAACACATC ATTACCAGTA AAATTGAACA CAAAGCGGTA CTAGATACGT GCCGTCAGCT TGAGCAAGAA GGCTATGAAA TTACTTATAT CGAGCCTCAG CCTAGCACTG GTCTTATTTT GCCTGAGCAG GTAAAAGATG CGCTTCGTGA AGATACTATT TTAGTATCTC TTATGATGGT GAATAATGAG CTTGGCACGG TCACTGATGT CAAGGCCATC GGTGAGATCA CTCGTGAAGC TGGCGTAGTA TTCCACGTGG ATGCGGCACA AGCTGCAGGT AAAGTTGAAA TTGATCTTGA AGCGCTAAAA ATTGATCTAA TGAGCTTCTC AGGTCACAAA ATTTATGGCC CTAAAGGTAT CGGCGCTTTA TATGTTCGCC GTAAGCCACG CATTCGTTTA CGTGCTGAGC AGCATGGCGG TGGCCATGAG CGTGGTATGC GTTCAGGTAC GTTGGCAACG CATCAAATCG TTGGTATGGG TGAAGCCTTT GCTATTGCCG CTGAGCGCTT AGAGCAAGAT CGCGCACATG CACAAAAGCT GCGTGACAAA TTATGGGCAG GCGTCCAAGA CATCGAAGAG ATTTATTTAA ACGGTGACTC TAATAACAGC GTACCAAACA TTGTCAATAT CAGCTTTAAC TTCGTTGAAG GTGAGTCATT AATGATGTCC CTAAAAGATA TGGCTGTCTC TTCAGGCTCT GCTTGTACAT CAGCCACGTT AGAACCCTCT TATGTACTAC GAGCTATCGG CCGCCCTGAT GAGTTGGCAC ACAGCTCAAT TCGCTTTAGC TTCGGCCGCT ACACCACCGA AGAAGACATC GATATCATCC TAGCTCAGAT TCATGAAGCC GTAGATAAGC TAAGAGATTT ATCACCCTTA TGGGATATGT ATAAAGACGG TGTGGATCTA ACCTCTGTAG AGTGGACTGA ACACTAA
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Protein sequence | MSNLNRPIYL DYAATTPVDP QVAKKMTEYM TFDGMFGNPA SRSHGYGWQA EEAVENARQQ IADLVNADPR EIVFTSGATE SDNLAIKGAA HFYAGRGKHI ITSKIEHKAV LDTCRQLEQE GYEITYIEPQ PSTGLILPEQ VKDALREDTI LVSLMMVNNE LGTVTDVKAI GEITREAGVV FHVDAAQAAG KVEIDLEALK IDLMSFSGHK IYGPKGIGAL YVRRKPRIRL RAEQHGGGHE RGMRSGTLAT HQIVGMGEAF AIAAERLEQD RAHAQKLRDK LWAGVQDIEE IYLNGDSNNS VPNIVNISFN FVEGESLMMS LKDMAVSSGS ACTSATLEPS YVLRAIGRPD ELAHSSIRFS FGRYTTEEDI DIILAQIHEA VDKLRDLSPL WDMYKDGVDL TSVEWTEH
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