| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1628 |
|---|
| Symbol | |
|---|
| ID | 5205096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2014956 |
|---|
| End bp | 2015477 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640599850 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001280519 |
|---|
| Protein GI | 148653426 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000474887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000421739 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAA CAACTCGAGG TAGATACGCC GTTACCGCGC TACTAGATCT GGCTATTCAA
GATGGCGACT CAACAAATGC TGTCTCTTTA TCAGATATAG CAAAGCGCCA ATCTATATCC
ATTTCTTATT TGGAGCAGTT ATTCTCTAAG TTAAGAAAAG CAGGATTAGT GACCAGTACT
CGAGGCGCCT CTGGAGGCTA TCATTTAGCA AAGCCATTGG CCGATATCGA CGTAATGACC
ATCATTACCG CGGTAGATGA GTCTGTGAAT GCCATGCAGT GTGGTGGCCA AGGCAACTGT
CAGGGCGGCG CTATGTGTCT CACCCATGAT TTATGGTGTG CCTTATCTAA GCATATTGAA
CAGTATCTAA AAAACATCTC ATTAGAACAA TTACTACAGA TGGAAAATGT AAAAGACGTC
TCAGACCGTC AACAACTTAT TTATGATGTG GCGACAGAAA GCACCACATC TCATTCAAAT
CCTAATATGA TATTCTCAGC CAGTGAGGTT AATCCAGCAT GA
|
|---|
| Protein sequence | MRLTTRGRYA VTALLDLAIQ DGDSTNAVSL SDIAKRQSIS ISYLEQLFSK LRKAGLVTST
RGASGGYHLA KPLADIDVMT IITAVDESVN AMQCGGQGNC QGGAMCLTHD LWCALSKHIE
QYLKNISLEQ LLQMENVKDV SDRQQLIYDV ATESTTSHSN PNMIFSASEV NPA
|
|---|
| |