Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1588 |
Symbol | |
ID | 5205593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1955135 |
End bp | 1955833 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599810 |
Product | cytidylate kinase |
Protein accession | YP_001280479 |
Protein GI | 148653386 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000460348 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000979309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTTC CTGTTATTAC CATTGATGGC CCAAGCGGCG CAGGAAAGGG CACAGTTTGT CTAAAACTGG CACAAGCTTT AGGATATCGA CTATTAGACT CAGGCGCCCT ATACCGTATT GTCGGTCTCA AGGCATTTGA GGCAGGTCTA TTAAATGAGT TATCCTTGAC TGAGCAAGTG GTGGCCGATA TTACTGAGCT TACTCAAAGC TTGGATATTC AGTTTTTACC ACGTGACACA GGTGACGTAG ATATTGTGGT CGATGGCGTT AATGTCGCCG GTGAAATCCG CAATGAAACG GTCGGAGGCT ATGCCTCAAA AGTTGCTGCT TTGCCTAGCG TGCGAGAAGC GCTACTGGCC TTGCAAAAGA ACATGGCCAA TGAGTCCGGC TTAATTGCCG ACGGTCGTGA TATGGGAACC GTAGTGTTTC CTAATGCGGA TGCCAAAGTT TATTTGACAG CCAGCGCTGA AGCCCGAGCT GATCGCCGAG TGGCTCAGTT ACAACAAGCG GGTGAACGTG CAGATTATGC CGCCATATTA ACAAGCATCC AAGAAAGAGA TGAGCGCGAT GAGAATCGCA GTGTTGCTCC GTCCAAGCCC GCTAAAGATG CTTTGGTATT GGACAGCTCA AGCATGAATG CGGACGATGT GTTTGCCCAG ATTAAAAAGT TTTGTCAGCA AAAAGGCATA AGCTTTTAA
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Protein sequence | MSFPVITIDG PSGAGKGTVC LKLAQALGYR LLDSGALYRI VGLKAFEAGL LNELSLTEQV VADITELTQS LDIQFLPRDT GDVDIVVDGV NVAGEIRNET VGGYASKVAA LPSVREALLA LQKNMANESG LIADGRDMGT VVFPNADAKV YLTASAEARA DRRVAQLQQA GERADYAAIL TSIQERDERD ENRSVAPSKP AKDALVLDSS SMNADDVFAQ IKKFCQQKGI SF
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