Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1581 |
Symbol | |
ID | 5205038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1943786 |
End bp | 1944592 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599803 |
Product | hypothetical protein |
Protein accession | YP_001280472 |
Protein GI | 148653379 |
COG category | [S] Function unknown |
COG ID | [COG0327] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0168425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAT CCTATGACCC TCAAACAGCG GCTAATATCC CTCAAACGGC TACGATGACC CCATCAGCTT TGGCGCAGTG GTGTGATGAC TATCTGCAAG CAGATGCCTT TAAAGATTAC TGCCCAAATG GACTACAAGT CGATGCGGAT GCCCCCATCC ATAAGATTGT CACCGGAGTG ACCGCCACTC AAAACCTTAT CGACGCAGCC ATTAGTGAGC AAGCTGATGC CATCTTGGTA CATCATGGTT ATTTTTGGAA AGGTGAAGAT CAGCCGTTAG TGGGCATGAA GGGCAAGCGT ATTCGTAGCT TACTACAAAA CAATATCTCA CTACTTGCCT ATCATTTGCC GTTAGATGCG CACCCTGTGA TCGGTAATAA CGCCACTTTA GCCCAGCTAT TGTCGCTTGA GATTACCGGT GCACTGTATC CTGAAGATAA CTATCCTGTG GGCAATATCG CACAGTGTGA GCCTACCGCT ATTGAGGACT TTATAGCGCG AGTCACCACC CAGTTACAGC GCACCCCAAC CCACATTGCA GCGGGCAATA AGCTGATTAC TAAAGTGGGG CTGTGTACTG GTGGTGCTCA AGATATGATT GAACAAGCTG CGAAGATGGG CTGTCAGCTT TATATATCAG GAGAGATATC AGAGCGTACC ACTCATGCTG CCCGTGAGCT GGGCATTGAT TATCTAGCCT GCGGTCATCA TGCTACAGAG CAAGGAGGCA TTAAGGCGTT AGGCGAGCTT ATTGTACAAA CGCACGGTGT ACAAGTACGC TTTATCGACG ATCCTAATCC TGCATAG
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Protein sequence | MTQSYDPQTA ANIPQTATMT PSALAQWCDD YLQADAFKDY CPNGLQVDAD APIHKIVTGV TATQNLIDAA ISEQADAILV HHGYFWKGED QPLVGMKGKR IRSLLQNNIS LLAYHLPLDA HPVIGNNATL AQLLSLEITG ALYPEDNYPV GNIAQCEPTA IEDFIARVTT QLQRTPTHIA AGNKLITKVG LCTGGAQDMI EQAAKMGCQL YISGEISERT THAARELGID YLACGHHATE QGGIKALGEL IVQTHGVQVR FIDDPNPA
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