Gene PsycPRwf_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1581 
Symbol 
ID5205038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1943786 
End bp1944592 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content48% 
IMG OID640599803 
Producthypothetical protein 
Protein accessionYP_001280472 
Protein GI148653379 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0168425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT CCTATGACCC TCAAACAGCG GCTAATATCC CTCAAACGGC TACGATGACC 
CCATCAGCTT TGGCGCAGTG GTGTGATGAC TATCTGCAAG CAGATGCCTT TAAAGATTAC
TGCCCAAATG GACTACAAGT CGATGCGGAT GCCCCCATCC ATAAGATTGT CACCGGAGTG
ACCGCCACTC AAAACCTTAT CGACGCAGCC ATTAGTGAGC AAGCTGATGC CATCTTGGTA
CATCATGGTT ATTTTTGGAA AGGTGAAGAT CAGCCGTTAG TGGGCATGAA GGGCAAGCGT
ATTCGTAGCT TACTACAAAA CAATATCTCA CTACTTGCCT ATCATTTGCC GTTAGATGCG
CACCCTGTGA TCGGTAATAA CGCCACTTTA GCCCAGCTAT TGTCGCTTGA GATTACCGGT
GCACTGTATC CTGAAGATAA CTATCCTGTG GGCAATATCG CACAGTGTGA GCCTACCGCT
ATTGAGGACT TTATAGCGCG AGTCACCACC CAGTTACAGC GCACCCCAAC CCACATTGCA
GCGGGCAATA AGCTGATTAC TAAAGTGGGG CTGTGTACTG GTGGTGCTCA AGATATGATT
GAACAAGCTG CGAAGATGGG CTGTCAGCTT TATATATCAG GAGAGATATC AGAGCGTACC
ACTCATGCTG CCCGTGAGCT GGGCATTGAT TATCTAGCCT GCGGTCATCA TGCTACAGAG
CAAGGAGGCA TTAAGGCGTT AGGCGAGCTT ATTGTACAAA CGCACGGTGT ACAAGTACGC
TTTATCGACG ATCCTAATCC TGCATAG
 
Protein sequence
MTQSYDPQTA ANIPQTATMT PSALAQWCDD YLQADAFKDY CPNGLQVDAD APIHKIVTGV 
TATQNLIDAA ISEQADAILV HHGYFWKGED QPLVGMKGKR IRSLLQNNIS LLAYHLPLDA
HPVIGNNATL AQLLSLEITG ALYPEDNYPV GNIAQCEPTA IEDFIARVTT QLQRTPTHIA
AGNKLITKVG LCTGGAQDMI EQAAKMGCQL YISGEISERT THAARELGID YLACGHHATE
QGGIKALGEL IVQTHGVQVR FIDDPNPA