| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1572 |
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| Symbol | |
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| ID | 5204875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1929617 |
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| End bp | 1930879 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640599794 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001280463 |
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| Protein GI | 148653370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00305296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00710721 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTCAG CATCAAATCT GCAAAATAAC CCAAATTACC CTAATCACCC ACAAGGCCAA
GATTGTCACG CCTCCGATGC CCCCAAAACT CAGCAAAACC AGAGGGATGA TACGGACCAT
GATGCCTCAC TAGAGCATGA GCCACCTGAG ACGCAGACCA GCAGTACTCA AGATGAGGTC
ATATATGATG ATGCTGAGTA TGACGATACT GAGTATGACG ATGAGCTAGA TGACGAGGAG
GTGTTGGCTT TTGATGATGA AGCCGCCACT GTAGCGCATA GCGGCGCTCA AGGTGATGCG
TTAGAGGTGT CTGAGCTGCA TACCGTCACT CAAGAGCAAG CAGGACAGCG TATCGATAAG
CTGGCCGCTG ATATGTTTAC TGAGCATTCG CGTGCTCAGT TACAAGACTG GCTAAAATCC
GGCAACTTGA CAGTCAATGA CCATAATGAG AAGGCCAAAT ATCGGGTCAA AATCGGAGAT
ATTGTTCGTC TAGAGGCCAA GCTTGAGCAA CACGGCAGCG ATCAGCCAGA AGATATTAAG
CTTGATATCA TCTATGAAGA TGACAGCGTG ATAGTGATTA ATAAGCCGGT CGGTATGGTG
GTGCATCCAG GTGCGGGCAA CTGGAGTGGC ACCTTGGTGA ATGGTTTGCT GTATCATTAC
CCCAATCAAG CACATTTGCC CCGAGCTGGT CTGGTACACC GTATTGACAA AAACACCTCT
GGCTTATTGG TTATTGGCAA AACCAAAGCG GCGCAGCTAG AGCTGCAAGA GCAGCTAAAA
GATAAAAGCG TCTATCGCCA CTATCAGTGT GTGGTGGCTG GTGATGCCCC AAGCCTAGCC
CGTCAGCGTA CCATTGATGC GCCCATTGGC CGTCATCGCA CCCAGCGTAC AAAAATGACG
GTGACCAGTA CCGGCAAAAC CGCCATTACT CATATTATGA AAATCACGCC GCTGAGTGAC
ACTTATAGCC TGCTCGATGT GCGCCTCGAA ACGGGACGTA CCCATCAAAT TCGGGTACAT
CTAAGCCACA TTGGCCATCC TATTATCGGT GATGATATCT ATGGCAATCG TCAACAGCTC
AGAGCAGGGC TTACCCCTGA GCAGCGCCAA GCCATTCAAA GCTTCCCGCG CCAAGCGCTG
CATGCTTACA AGCTGGGCTT TATTCATCCT GAGACGGGTG AGTCAATAGA GCTAACCGCG
CCACTACCAC AGGATATTGT TGAGCTGGCA CACACCCTAA GTGATGGCAG CTTTACGATA
TAG
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| Protein sequence | MSSASNLQNN PNYPNHPQGQ DCHASDAPKT QQNQRDDTDH DASLEHEPPE TQTSSTQDEV
IYDDAEYDDT EYDDELDDEE VLAFDDEAAT VAHSGAQGDA LEVSELHTVT QEQAGQRIDK
LAADMFTEHS RAQLQDWLKS GNLTVNDHNE KAKYRVKIGD IVRLEAKLEQ HGSDQPEDIK
LDIIYEDDSV IVINKPVGMV VHPGAGNWSG TLVNGLLYHY PNQAHLPRAG LVHRIDKNTS
GLLVIGKTKA AQLELQEQLK DKSVYRHYQC VVAGDAPSLA RQRTIDAPIG RHRTQRTKMT
VTSTGKTAIT HIMKITPLSD TYSLLDVRLE TGRTHQIRVH LSHIGHPIIG DDIYGNRQQL
RAGLTPEQRQ AIQSFPRQAL HAYKLGFIHP ETGESIELTA PLPQDIVELA HTLSDGSFTI
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