| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1552 |
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| Symbol | |
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| ID | 5205381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1902246 |
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| End bp | 1904888 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599770 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001280443 |
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| Protein GI | 148653350 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00679015 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAGG CAAATATGAG TAATATAAAT AGTAAACAAA AAAACAAACC TAACCTTGTT
GTGGTCGGTA ACGGCATGGT GGGGCATCAC TTTGTAGAGA AGGCCATTGA ACTTGGCTTA
AACACTACCT ATGACATTCA CGTCTTTGCT GAAGAAGATC GCCCAGCTTA TGATCGTGTC
TATTTATCAA GCTATTTTGA ACATAAAGAT GCCACCAAGC TAAACCTAGT GGATATGGCT
GACTATGATG CCACTGGGAT TCAGCTGCAT CTAAATAAGA AAATTGTAGA TATCGACAGC
GAGGCTCATA CCCTGACCGT AGAAGGCGGC GAAAGTGTTG AGTATAAAAA TCTAGTTTTA
GCAACCGGCT CATACCCGTT TGTGCCCCCT ATTGAAGGTG GTGATCATGC TCATTGTCAT
GTCTATCGTA CCATTGCTGA TTTGGATGAT ATTCTTGAAA CCGCCCAAAA ACCCAGTGCT
AAAAAAGGGG TGGTCGTCGG TGGCGGGTTG TTAGGGCTAG AGGCTGCCAA AGCATTGGTA
ACCTTGGGGC TTGATACTTA CGTGGTTGAA TTTGCCCCTC AGTTGATGGG TGTTCAGTTA
GACCCTGCTG GTGGTGAAAT CCTAAAGAAG AAGATTGAAG CATTGGGCGT TACCGTATTA
ACGGGAAAAA ACACCAAAGA AATTGTTCAT AACCGCAGTG TTTCCTTACA CCATGACATC
CATCAAAAAG ACAGTCAAAA TGAGGTGCAT CTGGAAAAAG ATACTTTCTT AACCATGAAG
TTTACAGATG ATACCGAACT AGATACCGAT TTAATCTTAT TTAGTGCCGG CATTCGTCCG
CAAGATGGCA TTATGAGAAG TAATCCTGAG TGCGGAGTCA CTTTAGGAGG CCGTGGTGGC
ATCTTAATCA ATGATCATTG TCAGACCAAT AATGAAGATA TCTATGCTAT CGGTGAATGT
GCAGTTTGGG ACAATAAAAT CTTTGGTCTG GTCGCCCCTG GCTATGCCAT GGCCAGTATA
TGTGCTGCTC AAATAGCGGG TGACACTGAG CAAACCTTTA CTGGCGCAGA TATGAGCACC
AAGCTTAAAT TAATGGGTGT TGATGTGGGC AGTATTGGCG ACGCTCATGC CACAACTGAG
GGCAGCCTAA GCTACATTTA TCAAAATCCC AATGAAGGCA TCTATAAAAA GCTGGTTACC
AGTGGCGATA ATAAAAAGCT GCTGGGCGCT GTCATGGTGG GTGATACCGA AGACTACAAT
AATTTATTGC AGTTATTCTT AAATGACATC GACCTTCCCG CTCATCCAGA GAGCTTGATT
TTACCCAATG TTGAAAAACC CTCAATGGGC ATTGAAAATC TTCCTGATAC AGCCACCATT
TGCTCTTGTT TTAATGTATC TAAAGGTGCC ATTTGTGGTG CGGTTGAAGA CGGGGCTTAT
TCACTGGCAG ATGTCAAAAG CTGCACCAAA GCAGGTACAG GCTGTGGCGG CTGTGCCCCT
ATGGTGAAAG ACGTGCTGGC TTATCAATTA ACCGACCTTG GTTTTGAGGT CAATAATGAT
CTGTGTGAGC ATTTTTCTTA TTCTCGCCAA GAGTTATATG GCTTAGTACG TGTTAAAGGC
ATCAAAACCT TTGATGATTT ATTAACACAG CACGGCACAG GCCGTGGTTG TGAGATTTGC
AAACCTGCAG TGGCTTCCAT TTTATCGTCT TGTTGGAATG ACTATGTCCT TAAAACAGAG
CTTGCGCCGC TGCAAGAAAC CAACGATTAC TACTTAGGCA ATATCCAAAA GGATGGCACC
TACTCTGTTG TGCCGCGTGT GGCTGGCGGC GAAATTACCG CTGATAAACT TATCGTATTG
GGTCAAGTGG CCAAAGACTT TAACCTTTAT ACCAAAATTA CCGGTGGTCA ACGGGTTGAT
TTATTTGGGG CACGGTTAGA ACAATTGCCT GATATTTGGG AGTGCTTAGT AGAGGCAGGC
TTCGAAACTG GCCATGCTTA TGGTAAATCA CTGCGTACTG TTAAGTCATG TGTTGGTGAG
AACTGGTGTC GTTATGGTGT CGCCGATAGC GTCGGCTTAG CCTTAACTTT AGAGAACCGA
TACAAGGGAG TGCGCTCACC GCATAAAATC AAAATGGGTG TTTCCGGTTG TACCCGAGAG
TGTGCCGAAG CCCAATCAAA AGACTTTGGG GTTATTGCTA CCGAAAATGG CTGGAATTTA
TACGTGGCCG GTAATGGTGG CATGGTACCT CGTCATGGAG AGCTATTCGC CACCGATTTA
GACACTGAGA CCTTAATCAA ATATATCGAC CGTATCACGA TGTTTTACAT CAAAACCGCG
GATAAGTTAC AGCGCACCTC AAAATGGCGT GAAAGCTTAG AAGGCGGATT AGAGTATTTA
CAACAAGTTA TTATCGAAGA TAGCTTAGAT ATTGCTCAAG AGCTTGAAGA TCAAATGCAG
TTGTTGGTTG ATAATTATGT CTGCGAATGG AAAGAAACCA TTACTGACAA AGAGAAGTTA
AAACGCTTCC GTCATTTTGT TAACAGCGAG CTAGGTGATG ACAATGTGGT ATTTGTGACT
GAACGTGAAC AAATTCGCCC TGCGACTGAG CTCGAAAAAG AAGCGGTAGA GGCCGTGGTT
TAA
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| Protein sequence | MIKANMSNIN SKQKNKPNLV VVGNGMVGHH FVEKAIELGL NTTYDIHVFA EEDRPAYDRV
YLSSYFEHKD ATKLNLVDMA DYDATGIQLH LNKKIVDIDS EAHTLTVEGG ESVEYKNLVL
ATGSYPFVPP IEGGDHAHCH VYRTIADLDD ILETAQKPSA KKGVVVGGGL LGLEAAKALV
TLGLDTYVVE FAPQLMGVQL DPAGGEILKK KIEALGVTVL TGKNTKEIVH NRSVSLHHDI
HQKDSQNEVH LEKDTFLTMK FTDDTELDTD LILFSAGIRP QDGIMRSNPE CGVTLGGRGG
ILINDHCQTN NEDIYAIGEC AVWDNKIFGL VAPGYAMASI CAAQIAGDTE QTFTGADMST
KLKLMGVDVG SIGDAHATTE GSLSYIYQNP NEGIYKKLVT SGDNKKLLGA VMVGDTEDYN
NLLQLFLNDI DLPAHPESLI LPNVEKPSMG IENLPDTATI CSCFNVSKGA ICGAVEDGAY
SLADVKSCTK AGTGCGGCAP MVKDVLAYQL TDLGFEVNND LCEHFSYSRQ ELYGLVRVKG
IKTFDDLLTQ HGTGRGCEIC KPAVASILSS CWNDYVLKTE LAPLQETNDY YLGNIQKDGT
YSVVPRVAGG EITADKLIVL GQVAKDFNLY TKITGGQRVD LFGARLEQLP DIWECLVEAG
FETGHAYGKS LRTVKSCVGE NWCRYGVADS VGLALTLENR YKGVRSPHKI KMGVSGCTRE
CAEAQSKDFG VIATENGWNL YVAGNGGMVP RHGELFATDL DTETLIKYID RITMFYIKTA
DKLQRTSKWR ESLEGGLEYL QQVIIEDSLD IAQELEDQMQ LLVDNYVCEW KETITDKEKL
KRFRHFVNSE LGDDNVVFVT EREQIRPATE LEKEAVEAVV
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