Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1539 |
Symbol | |
ID | 5205441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1883643 |
End bp | 1884929 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599757 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001280430 |
Protein GI | 148653337 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000020455 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGATC CTAAGTTATT ACGCCAAGAT TTAACTGAGC TAAAACAGAA GCTTGCCAAG CGTGGCTATG AGCTGGATGT GGATTTTTGG CAACAGATGG AGTCGCAGCG CAAATCGCTT CAGGTGATCA CCGAAGACTT ACAGGCCAAG CGTAATGCTG GGGCTAAGCA AGTGGGTGTG CTCAAGAAAA ATGGGGAAGA TGCCACTGAG CTACTGGCTG AGATGCAAAA TATCAGCAGC GAGATGAAAC AGGCTGAAGA GTCGCTAAAA GCGCTACAAG ACAAGATTAA TCAAGCGGCA TTACAAATCC CAAATATTCC AGCCGATGAC GTGCCAGAGG GCAGCTCTGA AGAGGATAAC GTTGAAGTGC GTAAATGGGG CACGCCGCGT CAGTTCGACT TTAAGGTCCA AGAACACAGC GACTTAGGCG AGGTTTTGGG TCAATTAGAC TTCGCTGCTG CTGCTAAGCT AACGGGTAGC CGCTTTAGCG TATTAAAGGG TCAATTGGCA CAATTACACC GCGCCCTTAT CCAGTTTATG CTCAACACGC ATACCGTAAA ATACGGTTAT ACCGAGTGTT ATGTCCCATA TATCGTCAAC TCAGATAGCT TAGAGGGTAC TGGCCAGCTG CCAAAATTTG AAGAAGATTT ATTTAAGCTG ACCAACCACA CCAACAATGA GGCAATGGGA TTTTATCTGA TCCCAACCGC TGAAGTGCCT ATGACCAACT TGGTACGTGG TGAGCGTCTA GATGCCAGTG AGCTGCCGCT AAAATTCACC GCACATACCC CTTGCTTTAG AAGTGAGGCC GGCTCGCATG GTCGTGACAC CCGTGGCCTT ATCCGTCAGC ATCAGTTTGA AAAGGTGGAG ATGGTCAATA TCGCTACCGC TGCACAATCT GATGAGCTGC TTGAGCAAAT GACTGGCCAA GCTGAGTATA TCTTGCAGCA ATTACAGCTG CCGTATCGGG TGGTTAAGTT GTGTACTGGC GATATGGGGT TTAGCGCCCT GCGTACTTAT GACATCGAAG TGTGGGTACC TAGCCAAGAT ACTTACCGTG AAATCTCAAG CTGTTCAAAC TGTGGTGACT TCCAAGCCCG CCGCATGGGT ACCCGTGTAA AAGAAGGCAA AAAAACTGAA CTTGTACACA CCCTAAATGG CTCTGGGCTT GCTGTGGGCC GCACCTTATT GGCGATTATG GAAAACCATC AAAACGCGGA TGGCAGCATC ACCATTCCAG AAGTACTGCG TCCTTATATG GGCGGTGCTG AGATTATTTC AGCCTAA
|
Protein sequence | MIDPKLLRQD LTELKQKLAK RGYELDVDFW QQMESQRKSL QVITEDLQAK RNAGAKQVGV LKKNGEDATE LLAEMQNISS EMKQAEESLK ALQDKINQAA LQIPNIPADD VPEGSSEEDN VEVRKWGTPR QFDFKVQEHS DLGEVLGQLD FAAAAKLTGS RFSVLKGQLA QLHRALIQFM LNTHTVKYGY TECYVPYIVN SDSLEGTGQL PKFEEDLFKL TNHTNNEAMG FYLIPTAEVP MTNLVRGERL DASELPLKFT AHTPCFRSEA GSHGRDTRGL IRQHQFEKVE MVNIATAAQS DELLEQMTGQ AEYILQQLQL PYRVVKLCTG DMGFSALRTY DIEVWVPSQD TYREISSCSN CGDFQARRMG TRVKEGKKTE LVHTLNGSGL AVGRTLLAIM ENHQNADGSI TIPEVLRPYM GGAEIISA
|
| |