Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1535 |
Symbol | |
ID | 5205437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1877625 |
End bp | 1878863 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640599753 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001280426 |
Protein GI | 148653333 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACATA ATGAATCAAC TGAGTCAGGA CGCACAGAGC AAAACATACA GGCCTTAAGC GGTATTAAGG TTTTGGATTT ATCTCGAGTG CTGGCAGGGC CGTCTAGTAC CCAAATTCTT GCAGACTTAG GTGCTGAGGT TATCAAGGTA GAGCGCCCTG TGGTTGGGGA TGAAACTCGG CACTGGAATC CGCCAAGCTT CACTGATGAG CAGACAGGGG AGCAGACCGC CGCCTACTTT GCCACTGTCA ACCGCAATAA GAAGTCAATC ACCGTGGACA TCACCACAGC AGAGGGGCAG CAGCTGATTA AAGCGCTGGC AAAAGACAGT GATGTGCTGG TAGAGAACTT CAAAGTGGGT GGGTTAAAAA AATACGGACT AGATTATGAG TCATTAAAAG CGCTCAATCA TCGACTGATT TATGCCTCCT TGACCGGCTT TGGGCAGACA GGGCCTGAGG CACATAAACC TGGATATGAC TATATCATTC AAGGCTTATC AGGGCTGATG AGCATCACAG GCCCAAGCGG TGGAGAGCCG CACAAAGTGG GCGTGGCTGT GGTGGATTTG TTCGCAGGCT TGCAGCTGAC TGTGGGCATT CAAGCAGCGC TTTTGGCGCG CGCCAATACA GGTGAAGGAC AGCATGTGGA TGTCGCCTTG CTCGATAGTG CCATTGCGAT GCTGGCCAAT ATCGGTATGA ATCACTTGGC TTCAGGCAAG ACGCCGCCTA GATTGGGAAA TGCCCATCCT AATATTACGC CTTACCAAGT ATATGCTACC GCTGATGACA GTCACTTTAT CTTGGCGTGT GGCAATGACA GCCAATTTGC CAAAGTGTGT GATGTCATTG GGGTAGCGCT GCATGAAGAC CAACGATATA GCACTAATCC TGCTCGAGTG CAAAACCGCG AAAGCTTACA GCAAGTACTC ACAGCGGTAT TTAAGACCAA AACCCGTGAG CAGTGGCTAC AGCTGCTGCA GCAAGCCGGC GTGCCTTGCG GTCCTATTCA TAATGTCACT GAGGCACTGG CAATGCCGCA GGTGCAGGCT CGCGATATGA TTGTCAGCTT CGAGGGTAGT CCGGTGCGCG CTTTAGGCAG TCCGATAAAG CTCTCTGGGA CGCCGGTGAG CTACCATAGT GCTCCGCCGG CCCTAGGCGC AGATACTGAG GCGGTATTAC ATAGCATGGG ACTTAGCGAT GAGAAGATAC AGCAGCTGCG GGCTCAGAAT ATCGTGTAG
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Protein sequence | MLHNESTESG RTEQNIQALS GIKVLDLSRV LAGPSSTQIL ADLGAEVIKV ERPVVGDETR HWNPPSFTDE QTGEQTAAYF ATVNRNKKSI TVDITTAEGQ QLIKALAKDS DVLVENFKVG GLKKYGLDYE SLKALNHRLI YASLTGFGQT GPEAHKPGYD YIIQGLSGLM SITGPSGGEP HKVGVAVVDL FAGLQLTVGI QAALLARANT GEGQHVDVAL LDSAIAMLAN IGMNHLASGK TPPRLGNAHP NITPYQVYAT ADDSHFILAC GNDSQFAKVC DVIGVALHED QRYSTNPARV QNRESLQQVL TAVFKTKTRE QWLQLLQQAG VPCGPIHNVT EALAMPQVQA RDMIVSFEGS PVRALGSPIK LSGTPVSYHS APPALGADTE AVLHSMGLSD EKIQQLRAQN IV
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