Gene PsycPRwf_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1529 
Symbol 
ID5206359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1869761 
End bp1870870 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content49% 
IMG OID640599747 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001280420 
Protein GI148653327 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT TAAATTCTAA TCCTGCCGCC TCAACGCTTA GCTCTGATCA CCTTGTGAAC 
ACCCAAAATG AGGCCACTGG CCAACACGCT GCACCGCTGC TTTTGGATAT TGAAAACTTA
TCTGTCACCT TCGGTAAAGG CGCGCGCGCT TTTCGTGCCG TTGATGATGT ATCACTGCAG
TTAAGACAAG GTGAAGTATT GGCCGTCGTC GGTGAATCTG GCTCTGGTAA ATCAGTAACC
ATGATGGCTT TAATGGGCTT ATTGCCTTCA AGCGCCACTG TGGCTGCCAA CAAAATGGAC
TTCGATGGCC AGCACATGCT GAGCTTATCA GGACGTGAGC GGCGCAAAAT TATTGGTAAA
GACATCTCCA TGATTTTCCA AAATGCCATG TCTTGCCTAA ACCCCAGCTT CACGGTTGAA
TATCAATTGG CAGAAGTATT AAAAACCCAT TTAGGCCTCA AAGGTGACGC TGCCCGTCAG
CGTATTTTAG AGCTGTTAGA GTTGGTTGAA ATTCCTGATG CCAAAAACAG ACTATCGGTA
TATCCGCACC AATTATCAGG CGGTATGAGT CAGCGCATAA TGATTGCTAT GGCACTGGCT
TGTGAGCCTA AGCTATTGAT CGCCGATGAG CCCACTACCG CACTAGATGT GACCGTACAG
GCGCAAATCA TGGACCTGCT CGCCCGACTA CAACGTGAAA AGCAGATGGC TATGGTGTTA
ATCACTCATG ACCTAGGACT GGTGGCACAA AATGCCCGCG ACGTGGCGGT TATGTATGCC
GGTCAAATGG TAGAGACCAA CAGGGTACCT GAGATATTTG AACAACCCTC ACACCCTTAT
ACTGAGGCGC TTTTACAAGC CATTCCTGAG CTTGCCATAG GCCAAGAGCG TTTAAACAGC
TTACCGGGTG TGGTACCCAG TCAATATGAC CGTCCCAAAG GCTGTTTACT CTCACCGCGC
TGCCCTTATA AGCAAGACAA GTGTGATGTG CCGCCGCCTA TCCTACCGAC CCCCAATGGT
CTGGTTCGAT GCATACAGAC GGATTTTCCA GCCCGTACCT CTACCCGTTT TTCAAACCCC
TCTTCTGAAT CAATGGGGAG CGCACTATGA
 
Protein sequence
MTTLNSNPAA STLSSDHLVN TQNEATGQHA APLLLDIENL SVTFGKGARA FRAVDDVSLQ 
LRQGEVLAVV GESGSGKSVT MMALMGLLPS SATVAANKMD FDGQHMLSLS GRERRKIIGK
DISMIFQNAM SCLNPSFTVE YQLAEVLKTH LGLKGDAARQ RILELLELVE IPDAKNRLSV
YPHQLSGGMS QRIMIAMALA CEPKLLIADE PTTALDVTVQ AQIMDLLARL QREKQMAMVL
ITHDLGLVAQ NARDVAVMYA GQMVETNRVP EIFEQPSHPY TEALLQAIPE LAIGQERLNS
LPGVVPSQYD RPKGCLLSPR CPYKQDKCDV PPPILPTPNG LVRCIQTDFP ARTSTRFSNP
SSESMGSAL