Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1519 |
Symbol | |
ID | 5206271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1854520 |
End bp | 1856553 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599739 |
Product | TonB-dependent heme/hemoglobin receptor family protein |
Protein accession | YP_001280412 |
Protein GI | 148653319 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCT CATCTTCTAA TCGTTTATCT CCGTTATGTT TAGCAGTTGC TTCAGCGCTT GTTGCTCAAG TAGCTAGCGC TCAGACTGAC ACGCCACGTA TGACGGCTCA AACTATCACA GTAACAGCCA ACAGCTCAGC CCGTGATAGA GCTCAGAATG ATTCGTTATA TACTGAAGAG TACACACCTG CTCAGCAAGC TTCCCATTTA AGTGACTTCT TAGAAGTTGT GCCTGGTGTG AGCGTCGGTG GTACCTCATC TGTTAACCAA CGTATTCGTG TGCGTGGCTT GGATGATACC AATCTAAAAG TATCCATTGA TGGGGCACGT CAAGAAGGTG CTTTGTTTTA CCACATGGGT GATGTAACCA TTGACCCAGA CCTGTTAAAG CAAACCGAGG TGGCTGTGGG TAATAACTCA GTAACCTTAG GTAATGATGC CTTAGGCGGT GCAGTAGCCT TTAAAACAGT AGATGCTGCT GACTTACTAA AACCAGGCCA AAAAATCGGT GCCAAGCTGC ATGCAGGTTA TGCCAGCAAT AACGATGAGG TATTAACTTC AGCGACTGTC TTTGCTGCTC CAGCTGAAAA TGTGGATTTG TTGGCTTACT ATGGTAAGCG AGACGTGGAA TCTGGTGAAG ATGGCGACGG CCGTGAGCTA TTTGAGGACA GTAAAGGCGA AAATATTTTA TTAAAAGCGG GCGCTACTAT CGCTGATGAT CATCGTATTG GTGCGAGCTT TAGTCGTACT GAGAAGAAAG GTATTTTTCC ATTTCGCCCA GATTTTCCTT CAAGACCTGA AGATCCTATT CCACAGCAAG TTAAGCGTGA CACTTACAAT GTAGATTATG GCTTTAATCC TGCCAACCCA CTTATTGACG TTTCTGCCAA TGCTTATCAA ACCAAGACCC AGATTTTACG TGATTCAGAT GGCAAAGCCG GTTATGAGTT CGATGCGGAA GTAAAAACGA CAGGCGCTAA AGTTGAAAAT ATTAGTATGA TTGAGAGCCG TATTGGCAAT CATAAGCTAA TCGCTGGTGT GGAGCATTAC AAAAAAGAAT CAGCAATGAG CCGTGACTTT GCTAAGGCAA GCAATGATGA GGCCAAAAAT ACTTCCGTAT ATTTAGAAGA TCAATGGCAC TTGGACAAAC TTACCTTAAC GCCTGGTGTT CGTTATGATC GTTATGAGTC ACCCAAATTT GTATCAGATG GCAAAACCTA TAATAATGTA GTAGGTGCTC TAGCAGCCAG CTATGAAATC GCTCCAAACA CACAAGTATT TGCAAGCTAT ACTCAACTGT TTAATGGCCC AGACCTAAGC CAGACTATCT TTAACTCAGA TGGCGCAAAT ACCTTTGTAA ATAGAGGTCT TAAGCCAGAA GAAGGGGATA ACTCAGAGGT GGGTATTAGC ACCGTATTAC GCGGTCTAAC TTTAGACAAT GATGCGCTGC AATTAAGTGC CAAGTACTTT AAGACCAATG TCGAAAACTA TCTACAGTTC GTACGTACAG GTGGTGGGCG TGAGGGTCTA GACTGTAACA CAGGTAGACC AGGCGGCAAT TGTCAGGGTT CTGTGAACTC TGATGAAGAC TATGAAATCA AAGGGGTAGA GTTAGCAGCT AACTACACCA CTAATAATTT TGGTATGGAG CTAAGCTACT CTCGCGCTCG TAGTGAAGGT GATAAAACAG GTAATAGCAT TCCTTCTGTC AGTGGCGGCA CTGCAGACTC AGGTGACCGT TACATGGTTA ACTTAAATTA TGATCCCACT AACGAGCTGG GTCTAGGCTG GCGCAGCACC TATGTGGCTT CAATTACGGA TAATAACGGC ATTACTAAGC CAAGCTACGA TGTCCATGAT GTCTATATGA GTTATGCACC TCGTCAGTTT AAAGATATAA AAGCCACGCT TGGTGTCTAT AATATCTTTG ATGAGACCTA TGCCAATCAC TCTTCACGCT TAAGTGACAG CGATGCAGCA ACTGACTTTG AGCCAGGTCG TAATATCAAG GCCTCTTTAA CCTACCAGTT CTAA
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Protein sequence | MRTSSSNRLS PLCLAVASAL VAQVASAQTD TPRMTAQTIT VTANSSARDR AQNDSLYTEE YTPAQQASHL SDFLEVVPGV SVGGTSSVNQ RIRVRGLDDT NLKVSIDGAR QEGALFYHMG DVTIDPDLLK QTEVAVGNNS VTLGNDALGG AVAFKTVDAA DLLKPGQKIG AKLHAGYASN NDEVLTSATV FAAPAENVDL LAYYGKRDVE SGEDGDGREL FEDSKGENIL LKAGATIADD HRIGASFSRT EKKGIFPFRP DFPSRPEDPI PQQVKRDTYN VDYGFNPANP LIDVSANAYQ TKTQILRDSD GKAGYEFDAE VKTTGAKVEN ISMIESRIGN HKLIAGVEHY KKESAMSRDF AKASNDEAKN TSVYLEDQWH LDKLTLTPGV RYDRYESPKF VSDGKTYNNV VGALAASYEI APNTQVFASY TQLFNGPDLS QTIFNSDGAN TFVNRGLKPE EGDNSEVGIS TVLRGLTLDN DALQLSAKYF KTNVENYLQF VRTGGGREGL DCNTGRPGGN CQGSVNSDED YEIKGVELAA NYTTNNFGME LSYSRARSEG DKTGNSIPSV SGGTADSGDR YMVNLNYDPT NELGLGWRST YVASITDNNG ITKPSYDVHD VYMSYAPRQF KDIKATLGVY NIFDETYANH SSRLSDSDAA TDFEPGRNIK ASLTYQF
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