Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1504 |
Symbol | |
ID | 5205271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1838479 |
End bp | 1839207 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640599724 |
Product | integrase catalytic subunit |
Protein accession | YP_001280397 |
Protein GI | 148653304 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGAA CCGCTTACTA CTATAAGCCT AAGCTATCTG ATGATAGTGA GATTATTGAT GTCTTAAACA AGCTTACTGA CAAGCACAAT CGTTGGGGTT TCCCAAAGTG TTTTAAGCGT ATACGCAAGC TTGGCTACTC ATGGAATCAC AAGCGAGTAC ACCGTGTTTA TACCACGTTA AACTTAAACC TACGCCGTAA GTCTAAAAGA CGGCTACCAA CACGTAATCC CCAGCCGCTA AGTGTGCCAA ACGCATTGGG GCATACTTGG TCTATGGACT TTATGAGCGA TAAGCTGCAC AACAATATTC GCTTTCGAAC CTTTAATGTG ATTGATGATT ACAACCGTGA AGTATTAGGC ATTGATATTG GCACCAGTAT GCCTTCACTT AGAGTGATTC GCTACCTTGA TCAACTAGCT GAGTGGCATG GCTATCCTAA GCAAATTCGT GTGGATAATG GTAGTGAGTT TACCTCTAAA GTGTTTACTG ATTGGGCATC GGCTCACGGT ATCTATATTG ACTATATCGA GCCTGGCTGT CCTTATCAGA ATGCTTATAT TGAACGGTTT AATCGCAGTT ATCGTAATGA GGTTTTAGAC TGCTACCTTT TCAACAATTT AAACGAGGTT AGTAAGCTGA CTGAGGATTG GATCACGGTT TATAACACCG AAAGACCCCA TGATTCACTT AATGATATGA CACCTGCTGA GTACAGACAG GTGGCTTAA
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Protein sequence | MSRTAYYYKP KLSDDSEIID VLNKLTDKHN RWGFPKCFKR IRKLGYSWNH KRVHRVYTTL NLNLRRKSKR RLPTRNPQPL SVPNALGHTW SMDFMSDKLH NNIRFRTFNV IDDYNREVLG IDIGTSMPSL RVIRYLDQLA EWHGYPKQIR VDNGSEFTSK VFTDWASAHG IYIDYIEPGC PYQNAYIERF NRSYRNEVLD CYLFNNLNEV SKLTEDWITV YNTERPHDSL NDMTPAEYRQ VA
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