Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1498 |
Symbol | |
ID | 5205265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1827959 |
End bp | 1829296 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599718 |
Product | amino acid permease-associated region |
Protein accession | YP_001280391 |
Protein GI | 148653298 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00333437 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.389664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAATG GACAAAAAAT CGGGTTGGCC ATGCTCACTG CCATTGTGTT CAGCTCAATG GTGGGTGCCG GTATCTTTAG CTTACCGCAG AATATGGCCG AGGTTGTAGG CGCAAATGCC ATTATTACCG CTTGGCTTAT CACCGGTGTG GGTATCTTAT TTCTCGCCGG CTGTTTTTTG CACTTATCAC GTCTTAAGCC CGAGCTTGAT GGCGGTATTT ATACTTATGC CAAAACCGGC TTTGGCGATT TGGCAGGTTT CTTTTCGGCC TGGGGATACT GGCTGTGTGC CACCATTGGC GTGGTGGGCT ATTTGGTAGT CGCATTTGCC GCTTTGGGTA GTTTTGTTGA TACCCCCAAT CAGGTTATCT TTGGGGAGGG CAATACCTTA TGGGCCTTAT TGGGTGAGTC TTTTATCTTG TGGCTGGTAC ACTACCTGGT GCTGCGCGGT GTCAAACAAG CGGCCTTTAT TAACTTGCTA GCAACTTTGG CAAAAAGCCT ACCGCTTATC GCTTTTATTA TATTTGCGTA CTATGCATTT GATATTGACA CCTTTAATAC TGATCGTGCT GGCACCAGTT TAGAGGTGCC TTTTATGGAT CAGGTCAAAA GCACCATGCT GATCACTTTA TGGGTGTTTA CCGGTATTGA AGGGGCCACT GTGCTATCAC AGCGGGCCAA AAGGCGCGCT GATATCGGGC GGGCTACTTA TATTGGTGTG ATCTTAGCAT TGGTGATATA TATTGCCATT ACCCTACTTT CGCTAGGGGT TATGAGCCGG GCCGATGTTG CGGCTCTAAG TAACCCGTCA ATGGCGGGTA TCATGGCGCA TATGACAGGC AGTTTGGGCA AATGGGCCAT TAGTATTGGC CTTGTTATCT CCGTATTAGC CTCTTATTTG AGCTGGATTT TGTATTCGGC TGAAGTGCCC TATACCGCAG CTAAATACCA GGCTTTCCCG CGTATTTTCA CCAAACAAAA TGCGCAAGGC ACACCCACTG CCTCATTGAT GCTCACCAGC TTCACTGTGC AGCTGTGTCT ATTAATGATA TTTTTGACAG GCGAAGGCTA CAACCTATTG GTGCGCATCT CAACCTCTAT GATTCTGATA CCCTACTTTT TGGTCGGAGC CTATTTGGTT AAGCTATCTT TTGCCCAATC AGAGCGGTGG CATATCAAGG CGGTGGGGCT AGGCGCCATT ATATATGGTG TTTGGCTAAT TTATGCCGCG GGCATTGATA ACCTATTGCT GTCACTATTA TTGTATGCAC CTGGCCTGAT GATTCTTTAT TATAGCCGCT ATCAGGCACA CCAGCAGACA CTACAGCCCC CATCTTAG
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Protein sequence | MLNGQKIGLA MLTAIVFSSM VGAGIFSLPQ NMAEVVGANA IITAWLITGV GILFLAGCFL HLSRLKPELD GGIYTYAKTG FGDLAGFFSA WGYWLCATIG VVGYLVVAFA ALGSFVDTPN QVIFGEGNTL WALLGESFIL WLVHYLVLRG VKQAAFINLL ATLAKSLPLI AFIIFAYYAF DIDTFNTDRA GTSLEVPFMD QVKSTMLITL WVFTGIEGAT VLSQRAKRRA DIGRATYIGV ILALVIYIAI TLLSLGVMSR ADVAALSNPS MAGIMAHMTG SLGKWAISIG LVISVLASYL SWILYSAEVP YTAAKYQAFP RIFTKQNAQG TPTASLMLTS FTVQLCLLMI FLTGEGYNLL VRISTSMILI PYFLVGAYLV KLSFAQSERW HIKAVGLGAI IYGVWLIYAA GIDNLLLSLL LYAPGLMILY YSRYQAHQQT LQPPS
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