| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1462 |
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| Symbol | |
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| ID | 5205670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1793547 |
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| End bp | 1794605 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599680 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001280357 |
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| Protein GI | 148653264 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0238326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.034718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCACC CCAGCACAGA CATTAACGCC GATTATGAGA TTAATGACTT GTCGCAAGTC
ACCAATCTTT TTGACTTTGA AGTATTGGCA AAAAAGAAAA TGAGCAAAGG CGCATTTGCC
TACGTCTCAA CTGGTGCCGG CGATGAAATT ACGCATCAAA ATAACCACCG TGCTTATGAC
CACATCACCT TAAACCCTAG AGTGTTAAAT GATGCAAAAA AGCTAGATAC TAAAGTGACC
TTATTTGGTG ATGAGTTGGC CTATCCAATT TTAGTCGACC CTTTTGCTTT CCAAAAAACC
ATGCATCCTG ACGGTGAGCT TGCTACTGTC AAAGGCGCTG GAGAGGCCAA AACAGCTTGT
GTCATTAGCT CCTTTACCAC CACCTCTTTA GAAGATATTC AGCAAGTTGC GACCACGCCG
ATTTGGTTTC AGTTGTATAT CCAAGATGAC TTAGAATTTG CCAAAAAAGT GCTAAAACAA
GCAGAAGCGG CCGGCTGCAA AGCGGTGTGT ATTACCCTAG ATTCTGTTGC CGCGGCTGTA
CGCAATGAAG AAGACAAGGT CGGCTTTGAG CTGTCTAAAG ACTTAAACAT GCCTTATAAG
ATTGGCCGGC CAGCCCCTGT CTCTTGGCAA GAAGTGGAAA TGCTGATTGC TTATACTTCC
TTGCCGGTAC TGATTAAAGG CATCGTTAAT GCTGAAGATG CACAACGAGC CCTTGATATT
GGCGCCTCTG GTATTATTGT TTCTAACCAC GGAGGGCGTA AATTAGATAC CGCGCCGCCA
ACCATTGAGG CATTACAGCG AGTAGCTGAG CGTGTCGACC ATAGAGTTCC CGTGCTCATC
GATGGCGGTA TCCGCCGTGG TACGGACGTC TTAAAGGCTT TGGCTTTAGG CGCTGACGCA
GTGCTATTAG GCAAACCGAT TGCTCAAGCA TTGGGAGCAG CAGGATCAGA GGGTGTGGCC
AAAGCGCTTA AAATCTTACA ACATGAATTT GAAATGGCAA TGACATTAAC TGGGTACAAC
ACCATTAATA GTATTGACCA TTCGGTAATC TGGAAATAG
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| Protein sequence | MTHPSTDINA DYEINDLSQV TNLFDFEVLA KKKMSKGAFA YVSTGAGDEI THQNNHRAYD
HITLNPRVLN DAKKLDTKVT LFGDELAYPI LVDPFAFQKT MHPDGELATV KGAGEAKTAC
VISSFTTTSL EDIQQVATTP IWFQLYIQDD LEFAKKVLKQ AEAAGCKAVC ITLDSVAAAV
RNEEDKVGFE LSKDLNMPYK IGRPAPVSWQ EVEMLIAYTS LPVLIKGIVN AEDAQRALDI
GASGIIVSNH GGRKLDTAPP TIEALQRVAE RVDHRVPVLI DGGIRRGTDV LKALALGADA
VLLGKPIAQA LGAAGSEGVA KALKILQHEF EMAMTLTGYN TINSIDHSVI WK
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