| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1428 |
|---|
| Symbol | |
|---|
| ID | 5206230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1751034 |
|---|
| End bp | 1752068 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640599646 |
|---|
| Product | peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 |
|---|
| Protein accession | YP_001280323 |
|---|
| Protein GI | 148653230 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0871608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.890025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAA ATAAATCTTT CAACAAATCT TTTATCTTTG TCTGCATCGC ATTGGGTCTG
GGTACTTTAA GCTCAGCATC AAATGCTGCA CTGACAATAG TTGAGCCAGG TAAGACAGGC
AATGCGCAAG TTCAGTGGGG TAACGCAGGC GGCCTCTCTG AAGCCCGCAA TATCATGTAC
TCAAACCCGA ATACCTCCTC ATACAACAGT ACCACCAGTC CTTCTTACTC AAGCAATAAC
TTTGCCACCA ACAGCACAAG CTACTACGAT TCACTGCCTA TTTCGACCGG CTCGCGCGGT
GTTATCGTAC TCGATGTAGA AACAGGCAAG CCTCTGTATC AAAAAAATGC CGATGTGGCA
CGTCCCATCG CCTCTATCAC CAAAATCATG ACGGCTATGG TGGTGTTAGA TGCCGGCCTT
GATATGCGTG AAGAGATTAA ACTTGATCCA GAAGATTTTG TGGGCCCTAA GCGTGCCAGC
TCACGCTTAA AATCAGGCGA CCGCATGAAC CGTGCTGAGC TTTTGTTAAT GGCCTTGATG
AAATCAGAAA ACCCAGCAGC AAAATCTTTG GCACGTAACT ATCCAGGTGG CTATGATGCC
TTTATGCGTG CTATGAATGC CAAAGCACGC TCACTTGGCA TGACCAGTGC TTTTTTTGGT
GACCCCACTG GACTAGACAA GCGTAACGTT GCCTCTCCGG TAGACTTAGC GAAAATGGTT
CAAGCTGCTG GTCAATATGA AGTGATTCGC CGCTTCTCCA CCACCAAAAA CTATGACTTC
TATGTGGCCA ACTACTCAGC GGGTAACCGT CCGTACCCTG CTAACAACAC CAGTAAGTTA
GTACGTAGCG GCACCTATCC TATTGGTATC TCAAAGACTG GTTTTATTAA TGAAGCGGGT
CAGTGTGTGG TGATGGAAAC TCGAGTGAAT AACAAGCCGG CCATTATCGT AATATTAGGG
GCAGATAACT CAAATACCCG CTGGAATGAT GCCGAAACCA TCTTAACCAA CTTAGCCTCA
CGTCGTACTA TTTAA
|
|---|
| Protein sequence | MSINKSFNKS FIFVCIALGL GTLSSASNAA LTIVEPGKTG NAQVQWGNAG GLSEARNIMY
SNPNTSSYNS TTSPSYSSNN FATNSTSYYD SLPISTGSRG VIVLDVETGK PLYQKNADVA
RPIASITKIM TAMVVLDAGL DMREEIKLDP EDFVGPKRAS SRLKSGDRMN RAELLLMALM
KSENPAAKSL ARNYPGGYDA FMRAMNAKAR SLGMTSAFFG DPTGLDKRNV ASPVDLAKMV
QAAGQYEVIR RFSTTKNYDF YVANYSAGNR PYPANNTSKL VRSGTYPIGI SKTGFINEAG
QCVVMETRVN NKPAIIVILG ADNSNTRWND AETILTNLAS RRTI
|
|---|
| |