Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1348 |
Symbol | |
ID | 5205135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1644347 |
End bp | 1645168 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640599566 |
Product | hypothetical protein |
Protein accession | YP_001280243 |
Protein GI | 148653150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000841172 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000779322 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTAATAC AAACAAATTT ATCAGCTGTT AAAGCCAATC AAGGTACACC GGTGGATGTG GTCGAAGAAT GGTTAAAAGA GAATGGGAGA GTCGAATCGC TCCCTGATAA TTTAGTGAAA GGTGATTCTT ATTTTAATAA TGTAAACACC AAGGAGATTC AAAAGAGACA AATTAAAAAC AAACAACGTG CACGTGATTT GCATGAGGCA ATCGTTAGTG TGGCTGGCAA TCTACCAAAG AGCAAGGCTC GTGAGATTGA TTTTTCAGAC GAGCATTACA CTAACTTGGT TAGCCAGGTT AAAAGTAGAT TTTTTAATGG GGAATTAGTT AAAGCAACTG ATTATAAAGG CGTTTATGCA ATATCAACAA TGAGTTGCAT CCTATCGTGG ATAGCCGCAG ATTTAAGATC AAAAGGCTTT GAGATCGTTA CTCTAAAAAC TGAAGCCAAA CGAAACCTTG GTTGGATTAC TGAAAGCGCG TTAAATGAAA GGCTTTTGAC TAAAAAGAAT GCTGAAGCTG TTCGCAAACG TCTAGAGCCA ATCAATGACT TATCTAGCCA GCAGATCTAT CACCAAACGA TTGCAGAGAT TGCACAAAGA ATATTAGCAG GCCAATTTGT AAGAGTTGAA GAATACACTG CTAGGCATTC AAGAGTTGTT ACCCTAAGAA TGGTTGCACT GGCTCTCAAA AAATCAAACA TAGTAAATGA TGTGGTATCT GTTAACTATG AGCGCGGAAG AAAAGCTGGT TGGGTGCTCG AATCTGAGGT GCATAAAAAG CTCACCAAGG TAAATGACTG CCCTCAAACT GAGGAGGCAT AA
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Protein sequence | MLIQTNLSAV KANQGTPVDV VEEWLKENGR VESLPDNLVK GDSYFNNVNT KEIQKRQIKN KQRARDLHEA IVSVAGNLPK SKAREIDFSD EHYTNLVSQV KSRFFNGELV KATDYKGVYA ISTMSCILSW IAADLRSKGF EIVTLKTEAK RNLGWITESA LNERLLTKKN AEAVRKRLEP INDLSSQQIY HQTIAEIAQR ILAGQFVRVE EYTARHSRVV TLRMVALALK KSNIVNDVVS VNYERGRKAG WVLESEVHKK LTKVNDCPQT EEA
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