Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1339 |
Symbol | |
ID | 5205364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1635760 |
End bp | 1636419 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599557 |
Product | putative prophage repressor |
Protein accession | YP_001280234 |
Protein GI | 148653141 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00520189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCTAG ATACATTTAG AGACAGGTTG ATATACGCCA AAGATGAAAA GGGACTGAAG CAAGTTGATC TTGTTAAAGC GACGGGAGTT AGTAAGGGCA CAGTCTCAAA CTGGATAAGC GGCAAAACTA CCCCAGACGA TACTGTAGCC CTGGGGGATT TGGCAAAAGC GCTTGGAGTG TCAGTAGATT GGTTAGTTAC AGGACGGGAG TCTAATAACC ATTCTTTTAG CAATGTAAGG CCTGTAGATA AACATGAAAT CAGAATGGCT CCTGTGCTTA ACTATGTCCA AGCCGGTGAG TTTTGTGAGT ATTTTGACGA CGCGATTGCT GATAGGTTTG AGCCTGTAAG CACAAAACAC CCCAAAAATT CTTATTGGGT TGAGCTCAAC GGGCTTAGCA TGATTCCGGA CTTTTATCCC GAGGAATTAG TTCTTATTAA TCCCGATATG CAACCCTCAC CTGGTGATTA TGTCGTTGCT AAAAAGGCAG GTGAAAATGC CGTAACGTTT AAAAAGTGGC GGCCACGTGG GTTTGATGAT GACGGCGTTG AGTATTGTGA GCTGGTACCT CTAAACCCCG ACTTCCCTAT CATTGATAGT AGGCATACTC CGTTCACAAT TTGTGGCGTG GCTGTTGAAC ATAAGAAGAA ATTAAAATGA
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Protein sequence | MKLDTFRDRL IYAKDEKGLK QVDLVKATGV SKGTVSNWIS GKTTPDDTVA LGDLAKALGV SVDWLVTGRE SNNHSFSNVR PVDKHEIRMA PVLNYVQAGE FCEYFDDAIA DRFEPVSTKH PKNSYWVELN GLSMIPDFYP EELVLINPDM QPSPGDYVVA KKAGENAVTF KKWRPRGFDD DGVEYCELVP LNPDFPIIDS RHTPFTICGV AVEHKKKLK
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