Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1269 |
Symbol | |
ID | 5204656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1562236 |
End bp | 1564575 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599488 |
Product | malic enzyme |
Protein accession | YP_001280166 |
Protein GI | 148653073 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.525931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.614845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA ATACTTCAAA TTCTATTCCT TCAGATCCTA ATTCCATTAA TGCAATGAAC AAAGAGCAGT TTGAACAATC CGCTTTGCAT TATCATGAGC ACCCAACACC TGGTAAGATC TCAGTTACCC CAACTAAGCA GATTGCTAAC CAACATGACT TAGCCTTGGC CTACTCTCCA GGGGTAGCTG TTCCTTGCTT AGAAATTCAA CGAGATCCAA AGCTTGCGGC AAAATATACC GCACGCAATA ATCTAGTTGG TGTTATTACC AATGGTACGG CCGTACTGGG TCTAGGTAAC ATCGGTCCTT TGGCATCAAA ACCGGTTATG GAAGGTAAGG GCGTATTATT TAAACGCTTT GCAGGTATCG ATGTATTTGA TATCGAAATT GATCAAAATG ACCCTGACAA ATTCATTGAA GCTGTGGCCT CTTTAGAGCC TACCTTTGGT GGTATCAACC TTGAGGACAT CAAGGCGCCT GAATGTTTCA AAATTGAGCG CGAACTACGT AAGCGCATGA ACATTCCTGT ATTCCATGAT GACCAACATG GTACGTCAAT CATTGTGGGC GCCGCTTTAA TTAACGCTTT AAAACTGATC GACAAAAAAA TTGAAGATAT CAAAGTGGTG TGTTCTGGTG CCGGTGCAGC CGCCATCTCA TGCTTAGACT TAATTTGTGC GTTAGGCGTT CAACGCTCTA ACATCTTTGT ATCAGACTCA CGCGGTATCA TCTCTACCAA ACGTGACAAC TTAGATGAAA GCAAGCAGCG CTTTGCTCGT GACACAGAAG CCACAAGCCT TAATGATGTG ATGGACGATG TGGATATGTT CCTAGGCTTA TCTATGCCAG GTATCTTAAC CCCTGACATG ATTAAGCGTA TGGCTCGTGA CCCTATTATC TTTGCACTGG CTAACCCTAC TCCTGAAATT ATGCCTGAAG TTGCGCATGC TGTTCGTGAT GACGTTATCA TGGCAACCGG TCGCTCAGAC TATCCTAACC AAGTAAATAA TGCCTTGTGC TTCCCTTATA TCTTCCGTGG TGCACTAGAT GTGGGCGCAA CCACAGTAAA CGAAGAAATG AAGATTGCTT GTGTGCACGC TATTGCAGCC ATGGCTCATG TAGAAGCCAC GCCACTGCAA GGCCAAAAAT ATGTGGATAG CTCTAAGATC TTTGGCCGCG AGTATCTGAT CCCTGGCCCA CTTGAGCCAA ACTTAATCGT TGAGATTGCC TCTGCGGTAG CAAAAGCGGC CATGGATTCG GGTGTAGCCA CACTACCGAT TGATGACTTT AGTGCTTATC GTCAAAAACT TTCAGCCTTT GTGTATAACT CAGCCTTTGT AATGAAGCCT TTGTTTGCGC GTGCCAAAGA AGATCCAAAA CGTATTGTCT TCTGTGAAGG TGAAGATCCT GACGTACTGC GTGCAGTTCA GGTAGTGGTT GATGAAGGCT TAGCTCAGCC AATCTTAGTG GGTCGCCCTG CAATTATTCA ATCACAGATC AATGCCTTGA GCCTGCGTCT AAAAGCAGGT GAAAACATTG AAATTGTAAA CCAAGATGAT GATCCACGCT ATAAAGACTA CTGGCAGACT TATTACGAGC AAAATAAACG CAAGGGCGTC AGTATTGAAC TTGCTCGCCG TGATGTGCGC CGTAAGACCA CTCTAATCGG CTCTTTGTTG GTCGAAAAAG GTGATGCTGA TGGTATGATC TGTGGTACTT TCAGTCACTA CAACTTGCAC TTAAACTACG TAGAAAGAGT CATTGGCAAG CTTGAGGGTG TTAAAAACTT CTACTCAATG AATGCCGTAT TGATGCAAAA CCGCAACTTG TTTATTGCCG ATACCTATAT TCATGAAGAC CCAACCGCTG AGCAGTTGGC AGAAATGACA GTACTGGCTG TAGATCAAAT GCGCCGCTTT GGCATTACTC CACGTGTTGC TCTGCTTTCA CACTCAAACT TCGGTACCTC TAACCGTGAT AGCGCCATTA AAATGCGCAA AGTGTATGAG CTGCTAAATG AAATGAATGT GGACTTTGAG TTTGATGGCG AAATGCATGG TGATTCAGCA CTAGATGACC GTATCCGTAA TCAAGACTTC CCACACAGTG TGTTAAAAGG CCCAGCTAAC TTGTTGATTA TGCCAACCCT TGATGCCGCT AACATTGCCT TTAATTTGTT AAAGACAGCT ACAGGTAGTG CCACCATTGG TCCAATCCTA TTAGGTGCCA GCAAGCCTGT ACATATCTTA ACGCCTTCTG CTACTGCTCG TCGTATTGTC AACATGACTG CCCTAGCGGT TACAGAAGCT CAAGATATCG AAGCCAATGC AAAAAACTAA
|
Protein sequence | MSDNTSNSIP SDPNSINAMN KEQFEQSALH YHEHPTPGKI SVTPTKQIAN QHDLALAYSP GVAVPCLEIQ RDPKLAAKYT ARNNLVGVIT NGTAVLGLGN IGPLASKPVM EGKGVLFKRF AGIDVFDIEI DQNDPDKFIE AVASLEPTFG GINLEDIKAP ECFKIERELR KRMNIPVFHD DQHGTSIIVG AALINALKLI DKKIEDIKVV CSGAGAAAIS CLDLICALGV QRSNIFVSDS RGIISTKRDN LDESKQRFAR DTEATSLNDV MDDVDMFLGL SMPGILTPDM IKRMARDPII FALANPTPEI MPEVAHAVRD DVIMATGRSD YPNQVNNALC FPYIFRGALD VGATTVNEEM KIACVHAIAA MAHVEATPLQ GQKYVDSSKI FGREYLIPGP LEPNLIVEIA SAVAKAAMDS GVATLPIDDF SAYRQKLSAF VYNSAFVMKP LFARAKEDPK RIVFCEGEDP DVLRAVQVVV DEGLAQPILV GRPAIIQSQI NALSLRLKAG ENIEIVNQDD DPRYKDYWQT YYEQNKRKGV SIELARRDVR RKTTLIGSLL VEKGDADGMI CGTFSHYNLH LNYVERVIGK LEGVKNFYSM NAVLMQNRNL FIADTYIHED PTAEQLAEMT VLAVDQMRRF GITPRVALLS HSNFGTSNRD SAIKMRKVYE LLNEMNVDFE FDGEMHGDSA LDDRIRNQDF PHSVLKGPAN LLIMPTLDAA NIAFNLLKTA TGSATIGPIL LGASKPVHIL TPSATARRIV NMTALAVTEA QDIEANAKN
|
| |