Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1263 |
Symbol | cysS |
ID | 5205975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1553778 |
End bp | 1555295 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599482 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_001280160 |
Protein GI | 148653067 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.227331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0688568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCAC CTGCCAAAAT CGCACAAACT CCTGAATTTT TATCAAAACA GCTACTGCAA CAGCAGGCGG CATTGAAGAT CTATGATTCG ATGACCACCA ACAAGCGCAG CTTTGAGCCA TTACAAGCGG GTAAAATTGG CATGTATGTG TGCGGTATGA CAGTTTATGA TTATTGTCAT ATTGGTCATG CGCGCGTCAT GGTCGCTTTT GATGTGGTGT CTCGCTGGTT GCGTCATCTG GGTTATGAGG TTAATTATGT GCGCAACATT ACAGATATTG ATGACAAGAT TATTGCGCGT GCCAATGAAA ATGGTGAGCC GATTGGTGAG TTGACCCATC GCTTTATTAA AGCGATGCAT GAAGATGCGG CAGCTTTGGG CTGTGAAAAC CCCGATGCTG AGCCACGCGC CACCGAGCAC ATTGATGAGA TGCTTGATAT GATTGGCACG CTTGAGCAAA AACAGCATGC TTATGCCGCC TCTAATGGTG ATGTCTATTA TGCCGTTGAT ACCTTTGAAG GATATGGCAA GCTGTCTAAG CGCAAACTAG AGGACTTGCA AGCCGGCTCA CGTGTGGATG TGGACACCGA TAAGAAAAAC CCATTTGACT TTGTGCTATG GAAGGCGGCC AAAGCCGGTG AGCCTCAGTG GGCATCAAGC TGGGGTGGTG GCCGACCTGG GTGGCACATT GAGTGCTCGG CCATGTCGAC TAAGTGCTTG GGTAATAGCT TTGATATCCA TGGCGGCGGT CACGACTTAC AGTTCCCGCA TCATGAAAAT GAGATTGCCC AATCCGAAGC GGCTACGGGC TGCACGTATG CTCATAACTG GATGCATGTG GGCTTTATTA ACGTTGATGG CGAAAAAATG TCCAAATCAT TGGGCAACTT CTTCACCATT CGTGAAGTGA TGCAGAAGTT TCATCCTGAG ACCATCCGCT TCTTTATTTT ATCAAGTCAT TATCGCAGTC AGGTGAACTT CTCTGATGCG GCGTTAAAAG AAGCACATTC TGGTTTGACC CGTATCTATC AAGCCCTAAA GGCAGCCGAT GCCGTACTAA ATACTTCAGT AAGTGCCGCT GAGTCTATTG AGTCTATCAA TGCTGAGCAC GCCGGTACCC ACAGTGCTGA CTTTATCGCC GCGATGAACG ATGACTTCAA TACCCCGCAG GCCATTAGTG TGTTATTTAG CTTGGCAAAA GAGGTCAATA AACTGGCCCG TGACGCGGAT GATGCTGACA CACAGGCTCA ATTACAACTG CAAGCTGTTC AACTAAGAGC GCTGGCAGGC ATCTTAAATA TTGGTCAGTT AAATCCTGCC GAGTTCTTAC AGGCACAAAT TGGTGAGGTG GCAGAGGACC AAATGAGTGA TGAGCAAATT GAAGCGTTAA TTCAAGAGCG CCTCGACTCT AAGGCCAATA AAAACTTTGC ACGTGCTGAT GAGATTCGTG ATTTATTGCA AAATAGCGGT ATTGAGCTTG AAGATGGTAA GCTTGGTACC ACGTGGCGCC GCACCTAA
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Protein sequence | MSSPAKIAQT PEFLSKQLLQ QQAALKIYDS MTTNKRSFEP LQAGKIGMYV CGMTVYDYCH IGHARVMVAF DVVSRWLRHL GYEVNYVRNI TDIDDKIIAR ANENGEPIGE LTHRFIKAMH EDAAALGCEN PDAEPRATEH IDEMLDMIGT LEQKQHAYAA SNGDVYYAVD TFEGYGKLSK RKLEDLQAGS RVDVDTDKKN PFDFVLWKAA KAGEPQWASS WGGGRPGWHI ECSAMSTKCL GNSFDIHGGG HDLQFPHHEN EIAQSEAATG CTYAHNWMHV GFINVDGEKM SKSLGNFFTI REVMQKFHPE TIRFFILSSH YRSQVNFSDA ALKEAHSGLT RIYQALKAAD AVLNTSVSAA ESIESINAEH AGTHSADFIA AMNDDFNTPQ AISVLFSLAK EVNKLARDAD DADTQAQLQL QAVQLRALAG ILNIGQLNPA EFLQAQIGEV AEDQMSDEQI EALIQERLDS KANKNFARAD EIRDLLQNSG IELEDGKLGT TWRRT
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