Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1248 |
Symbol | |
ID | 5205613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1535255 |
End bp | 1537567 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599467 |
Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001280145 |
Protein GI | 148653052 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.757925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0192474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTTG AACAGGTTTG TATTGTTGGT CTGGGCCTTA TTGGCGCAAG CCTTGCTCAA GCAATTAGGG ACAGACAGCT GGCTGCAAAG CTTGTGGCCG TAGACAGACA TGCTCCTAGT ATTAAGTCAG CGATAGAGGC AGGCGTTATT GATAAGGGGA GCGACTCACT GTTTGAGGTG GTCGCAGGCA GTGATTGTAT TATCCTGGCG GTACCGGTCA AGGCAGTGGG TGCTGTATTT GCTGATATTA ACAGCGCTAT GCAGCAAGGT CTGATTACGA CAGCGTGTTT AATTAGCGAT GTCAGTAGTA CCAAACAGAA CGTGGTAGAT GCTGCACAAA AGGCTTTTGG TCAGCTGCCC ACAGGGTTTG TGCCTGCACA CCCGATAGCC GGTGCCGAGC AGTCTGGGTT TCATGCCCGC CGCAGCGATT TGTTTGTCAA TCACAGCCTG ATTGTTTGTG AATTAAAAAG CACCACACCT AAGGCCATTG CTCAAATCAG CCAGTTGTGG CAGAGTGTGG GCGCGACAGT CATGAAAATG GATGTGGCAC ATCACGATGC AGTATTGGCT TACACCAGTC ACTTGCCGCA TTTGTTGGCT TTTAATCTGG TTGAGCAGTT GGCGGATCAT GATGATAATA TGGATATTTT TCGTTATGCT GCTGGCGGGT TTCGCGATTT TACCCGCATT GCCGCAAGCG ATCCGGTAAT GTGGCATGAT ATTTTTATTG CCAACAAACC TGCTTTGTTA AATGCATTAG ATGAATACAG TCAATATCTA GCTAAGCTAC GCCGCCTTAT TCAAGATGAG GATTCAACTC AGCTACTGGG GCTTTTGGGC CGCGCTCAGT CTGCCAGAAA GCACTTTGGG CATATGCTAA CCGGTACCCC CTATACTAAA AATCTCACGG AAATATCTAA CACAAAAACC AATACGGAAA ACTCTATGGC AACCTCAACC CATGCCTCTA GTGCATACAT TATTACTCCA AGCTCAACCA TTAATGGCAC TATCGCTGTG CCGGGTGATA AGTCAATATC ACATCGTAGC ATCATGTTTG GTAGCCTTGC TGAAGGCGTG ACTCGGGTAA GTGGCTTTTT AGAAGGCGAG GATGCCCTAG CGACACTGCA AGCCTTTAGA GACATGGGCG TGACTATTGA GGGGCCAGAA AATGGTAATG TGGTCATTCA TGGGGTAGGT ATCAATGGTC TAAAGCCTAG TCGCACCCCT TTATATATGG GGAACTCAGG CACTACCATG CGTCTATTAT CGGGTATTTT GGCAGCCCAA AGCTTCGATA GCGTATTAAC CGGCGATGCA AGCTTATCTA AGCGCCCGAT GGAGCGTGTG GCCAAGCCGC TGCGTGAAAT GGGTGCCACC TTACAGACCA CAGGAGAGCG AGGCACAGCG CCTATTAGCA TCACGGGCAG CGACAAGCGT GGCAGTAAGC TGCATGGCAT CACTTATGAC ATGCCGGTGG CATCAGCTCA GGTAAAATCT TGCTTAATCT TGGCCGGTCT ATGGGCTGAG GGGAAGACCA CCGTCATTCA GCCAGAGATT AGCCGTGACC ACACCGAGCG TATGTTAAGC GCGTTTGGTT ATGATGTGGA AGTCGAGGGC AATACCATCA GCGTTGAGGG CGGCGGTAAG CTGACTGCTT GTGATATTGC TGTACCTGCT GATATCTCCT CAGCAGCATT TTTTATGGTG GCGGCCTCTA TTGCCAAAGA CAGCCAAATT ACCATCACTC AAGTGGGTAT GAATCCGACA CGTACTGGTA TCATTGATAT CTTAAAGCTT ATGGGTGCAG ACATTAGCCT AAGTAATGAG ACTTTTGTGG GCGGTGAGCC TGTGGCAGAT ATCACTATCA AGTCGGCTCA GTTAAAAGGC ATTACCATTC CAGAGGCGCT AGTGCCCTTG GCGATTGATG AGTTTCCAGT GCTATTCGTT GCCGCCAGCT GTGCCCAAGG TCAAACCGTG TTAACGGGAG CCAAAGAGCT TCGTGTAAAA GAATCAGATC GTATCGCAGT AATGGCAGAT GGTCTGACCC AATTGGGTGT GGACTGTGCA GTAACTGAAG ATGGCATTAT TATCGAGGGT AAAGGCGATG GTCAATCTCA TCAAGCGGTG TTTGGCGGCG GTGAAATCTA CTCTCACCAC GATCACCGTA TCGCGATGAG CTTCTCTGTG GCAAGCTTGC GTGCTACTGA CACCATTACC ATTCAAGGGG TAGAAACCGT GAATACTAGC TTCCCAGGCT TTGCAGAGTT GGCAAATAAA ATTGGTATGA ACCTAGCCAC TCGTCAGGGC TAA
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Protein sequence | MLFEQVCIVG LGLIGASLAQ AIRDRQLAAK LVAVDRHAPS IKSAIEAGVI DKGSDSLFEV VAGSDCIILA VPVKAVGAVF ADINSAMQQG LITTACLISD VSSTKQNVVD AAQKAFGQLP TGFVPAHPIA GAEQSGFHAR RSDLFVNHSL IVCELKSTTP KAIAQISQLW QSVGATVMKM DVAHHDAVLA YTSHLPHLLA FNLVEQLADH DDNMDIFRYA AGGFRDFTRI AASDPVMWHD IFIANKPALL NALDEYSQYL AKLRRLIQDE DSTQLLGLLG RAQSARKHFG HMLTGTPYTK NLTEISNTKT NTENSMATST HASSAYIITP SSTINGTIAV PGDKSISHRS IMFGSLAEGV TRVSGFLEGE DALATLQAFR DMGVTIEGPE NGNVVIHGVG INGLKPSRTP LYMGNSGTTM RLLSGILAAQ SFDSVLTGDA SLSKRPMERV AKPLREMGAT LQTTGERGTA PISITGSDKR GSKLHGITYD MPVASAQVKS CLILAGLWAE GKTTVIQPEI SRDHTERMLS AFGYDVEVEG NTISVEGGGK LTACDIAVPA DISSAAFFMV AASIAKDSQI TITQVGMNPT RTGIIDILKL MGADISLSNE TFVGGEPVAD ITIKSAQLKG ITIPEALVPL AIDEFPVLFV AASCAQGQTV LTGAKELRVK ESDRIAVMAD GLTQLGVDCA VTEDGIIIEG KGDGQSHQAV FGGGEIYSHH DHRIAMSFSV ASLRATDTIT IQGVETVNTS FPGFAELANK IGMNLATRQG
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