Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1247 |
Symbol | |
ID | 5205612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1534024 |
End bp | 1534974 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599466 |
Product | transporter DMT superfamily protein |
Protein accession | YP_001280144 |
Protein GI | 148653051 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.478389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0239516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAG CCACTCCCAC CAATAGCACA CCCAGTAAGC CCAAGCCTGC GGTGGTTCAT ACCACCAGTA AGGGCATCAT CACCGCTTTA ATTGCTTTTT CAATATGGGG AAGTTTTCCT TTTTATTTCA AGCGTTTGGG TGAGTATAAT GCCGTAGAGA TTATCGGCCA CCGTATTATT TGGACCTTTG TGTGCCTAAG TTTGGTGCTG ATAGTAAGCA AGCGCTGGCA GTGGATTGCT ACTTTAAAGG CGCAGCCGCG GCTGATTTGG ATTACCTTTT TATCAAGCCT TATCATTGCC ACTAACTGGC TCACTTATGT GTGGGCGGTC AATGCCAATC AGATTTTAGA GGCCAGTTTG GGCTATTTTA TTAGCCCGTT AATTGGTATT TTATTGTCTT TGGTATTCTT GCAAGAGCGT TTGCGGCCGC TGCAATGGAT AGCGGTCGGC TTTGCCATCT CCTCGGTACT TATCCAAGTA ATTATGCTGG GTAATTTGCC GTGGGTGTCT TTGATATTGG CGTGCTCCTT TAGTGTGTAT GGGGTTATGC AAAGACGGAC GCCACTGCCT GCGCTTGACT CGCTGTTTTT GGAAACGGCG CTACTTGTGC CGCTATGTAT TTGGTGGTTT ATGACATCCA ATGTGGCCAG CTCAAGTTTG TCATTTTGGT GGAGCGATAA CATTTGGTTT TTGATGTTGG CCGGTCCGAT CACCCTAATA CCGCTGCTGC TGTTTAACCA ATCGACCAAG ATGGTGGCCT ATAGTATTTT AAGCTTTATG AACTATTTGA CCCCAACGAT TATTTTCTTA TTGGCAATAT TTTATTACCA TGAGCCTTTT GATACACATC GGCTAATGAT ATTTGGTCTT ATCTGGTTTG GGCTTTTGTT GTTTAGTATA GATTTATGGC AAAATCGCCC CAGCAAACAG CTCAATAAGC GTGCTAATTA A
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Protein sequence | MSLATPTNST PSKPKPAVVH TTSKGIITAL IAFSIWGSFP FYFKRLGEYN AVEIIGHRII WTFVCLSLVL IVSKRWQWIA TLKAQPRLIW ITFLSSLIIA TNWLTYVWAV NANQILEASL GYFISPLIGI LLSLVFLQER LRPLQWIAVG FAISSVLIQV IMLGNLPWVS LILACSFSVY GVMQRRTPLP ALDSLFLETA LLVPLCIWWF MTSNVASSSL SFWWSDNIWF LMLAGPITLI PLLLFNQSTK MVAYSILSFM NYLTPTIIFL LAIFYYHEPF DTHRLMIFGL IWFGLLLFSI DLWQNRPSKQ LNKRAN
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