Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1196 |
Symbol | |
ID | 5205584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1461964 |
End bp | 1462926 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599416 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001280095 |
Protein GI | 148653002 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAA AAAGATTGAC CGCCTTTCAT AGCGTAGCAC GCTTAAAAAG CTTTAGTGAG GCAGTATCAC AAACCCAGCT GTCACAGCCG ACTTTAAGCC GCTTAATCAA GCAGTTAGAG GATGATCTGG GCGTTATCCT CATTGACCGC TATCATCGTC CGTTACAGCT GACTGAGGCG GGCAGATTTT TTTATGAAAA AATTGATATC ATCTTAAAAG AGCTCGATAG CACCATCAGT CTGACCCAAA AAATCGCGCA TCCGCCAGAT ACCCTAAACA TTGGCTTTGT ACCCTCAGTG CTTTATGGGC TACTGCCGAC CATTATCTCA CGTCTTAAGC AGCGCTTGCC GAATTTGGAG GTGCATTTAA AAGACATCAG TTCCTTCAAA CAGATCGGTG CGCTCAAGGC CGGCGAGATT GACGTGGGTT TTGGCCGATT TGCCCATAAC GATGAGCATA TTTATCAGCT GTTACTGCGT CATGAACGCT ACGTCGCCGC CCTTCCCAAT ACTCATGAAC TGGCTGGCAG CCATGATATT CACTTATCAC AGCTGCAAAA TAGCCGAGTT ATCTTATACC ACCAAACCCA TCTTCCTGTC CCTCAACTTG CCAGCGCTTC AACAACTGAG GCTCAAAACA CAGACCCTAG TCTTATTAGC GAGCCGCTGC TGCATCTGTT TGCCAAGCGC TCAGCCTTAC CGCATCACAC CACCTCGGTT AGTGACATTC AGTTGGCATT AGGCTTGGTA GCCGCCGGTG AAGGCATAAC GTTAGTGCCT GATAGCCTAA AATCAGTACG CTCTGAGCAA ATCAGTTACC GTACCTTAAT TCATGAAGAT GCCACCTCAC CGATTTACAT CTGTAGCCTG ACCACCCCCA CGCACCCAGC CTTTACTACC TTACTTGAGG TGATTTATGC CATTTATGAA GAGCGTGGTA TCACCTATCG CCGAGTGATC TAA
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Protein sequence | MQLKRLTAFH SVARLKSFSE AVSQTQLSQP TLSRLIKQLE DDLGVILIDR YHRPLQLTEA GRFFYEKIDI ILKELDSTIS LTQKIAHPPD TLNIGFVPSV LYGLLPTIIS RLKQRLPNLE VHLKDISSFK QIGALKAGEI DVGFGRFAHN DEHIYQLLLR HERYVAALPN THELAGSHDI HLSQLQNSRV ILYHQTHLPV PQLASASTTE AQNTDPSLIS EPLLHLFAKR SALPHHTTSV SDIQLALGLV AAGEGITLVP DSLKSVRSEQ ISYRTLIHED ATSPIYICSL TTPTHPAFTT LLEVIYAIYE ERGITYRRVI
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