Gene PsycPRwf_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1194 
Symbol 
ID5206152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1459730 
End bp1460989 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content46% 
IMG OID640599414 
Productmanganese transporter NRAMP 
Protein accessionYP_001280093 
Protein GI148653000 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CTTCGACTCA CGCCTCGCCC AAAGACAAAG GCATTAATTG GCAAGCTTTT 
GGTCCCGGTA TCTTACTGGC CTCAGCAGCC ATTGGGGGCT CACATCTTAT CTCATCGACA
CAAGCTGGCG CGTTATATGG TTGGCAATTG GCGATTATGA TTATCCTCGC CAACTTTTTT
AAATATCCCT TTTTTAAATT CGGTACCGAC TATGTTTATG AAACCGGAGA GTCGTTGGTT
GCCGGATATG CCAAAAAATC ACGCCTATAT CTGTGGGCAT TTTTTATCTT ATCTTTGGCA
GCTTCGGTCA TTAGCACCGG TGCAGTGGCG CTATTGGCGG CAGTTATTCT AGGGTTTATG
TTGCCTGAAA GCTGGGGGCT ATCTAATGGT GTTTTGTCGA TTATCGTCAT GGGCGTGTCT
TGGCTATTTT TGATTCTCGG TCACTACAAG ATGCTTGATA AGCTTACCAA ATGGATTATG
GTGGCGCTGA CTGTGACCAC GTTAGCTGCG GTGATTATTG CGGCAGGCAA GCCTACCATT
ATGGCACCAG ATTTTGTGGC CGCCTCACCT TGGAATTTGG CCACCTTGGG CTTTATTGTG
GCCTTAATGG GCTGGATGCC GGCACCACTT GAGTTCTCAG CGATTAATTC TATGTGGATT
TCGGCCAAAG TAAAATCGGA CCACACCACA CACCGTCAGG GCTTAATTGA CTTTAATGTC
GGTTTTATCG CCACCTCTTT ATTGGCACTG GTATTTTTGG CATTGGGTGT GTTTGTACAG
TATGGCTCAG GCGTTGAAAT CCAGACCCAA GGCGGTGCTT ATGTGGGGCA GCTGATTAGT
ATGTATACGG CCACCATTGG TGAGTGGTCA CGTCTATTGG TAGCATTTGT GGCCTTTATG
GTGATGTTTG GTACCACCAT TACCTGTGCT GATGGTTATG GCCGTATCAA TGCCGAAAGC
TTACGTTTAA TCAAAGACGA TGCCAATATT TCACAACAGC AAATCATCCT GTGGACCACC
TACTGTATTG TGGGCGGCTA TATTATTATC ACCTTCTTTA CCGGGCAGCT GGGCGCTATG
CTAAAGTTTG CTATGATTAC AGCTTTTGTT TCAGCCCCAA TTTTTGGTTG GTTAAATTAC
TCACTAGCCA AAGATCAGCA GCACCTATCA GCTGGCATGA AGCTGTACAG TATTGCCGGC
TTGATCTTCT TAGGCGGTAT TGCTTTGTTG TTTATGGCGC AATTATTTGG CCTAATCTAA
 
Protein sequence
MSTSSTHASP KDKGINWQAF GPGILLASAA IGGSHLISST QAGALYGWQL AIMIILANFF 
KYPFFKFGTD YVYETGESLV AGYAKKSRLY LWAFFILSLA ASVISTGAVA LLAAVILGFM
LPESWGLSNG VLSIIVMGVS WLFLILGHYK MLDKLTKWIM VALTVTTLAA VIIAAGKPTI
MAPDFVAASP WNLATLGFIV ALMGWMPAPL EFSAINSMWI SAKVKSDHTT HRQGLIDFNV
GFIATSLLAL VFLALGVFVQ YGSGVEIQTQ GGAYVGQLIS MYTATIGEWS RLLVAFVAFM
VMFGTTITCA DGYGRINAES LRLIKDDANI SQQQIILWTT YCIVGGYIII TFFTGQLGAM
LKFAMITAFV SAPIFGWLNY SLAKDQQHLS AGMKLYSIAG LIFLGGIALL FMAQLFGLI