Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1183 |
Symbol | |
ID | 5205019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1445006 |
End bp | 1446688 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640599403 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001280082 |
Protein GI | 148652989 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGT TTTGGACTGA GTTTTATCCA GAAGGTGTCG CCAAGGAGCT GCCCCCTCTC AACCAATCAT TGAATGACTT CTTCGATGAT ACCTTAACAA AATTTGCCAA AAATAAGTTT ATGACCAATA TGGGCGTGTC ATATACCTAT GCCGAAGTCG ATCAGATGTC TAAAAACATC GCTGCATGGA TTCAGACTCT AGGATTGGCA CAAGGCTCAA CGGTTGGGAT TATGATGCCT AACGTTAATC AGTACTTGCC TATAGTTATT GGCGCTTTAC GCGCAGGTAT GGTTCTAACT TTAATCAACC CTCTGTACAC CTCACGAGAG CTAAAACATC AACTGATTGA TGCCGATGCC AAGATTATTT TTATTCTAGA GCCTTTCACC CATGGCCTAG ACTCTATTAT TGATAAGACC CCTGTTGAAA CCGTCGTTGT CAGTGCCATT GGTGACATGT TAGGCACAGC AAAAGGCGCT TTGATTAACC TAGCCGCCAA ACACCTCAAA AAAGCAGTGC CTAACTATGA TCTATCAAGC TGCTCAAAGT GCCAAGAAGT TAGCTTTAAA GCGGTGTTAA AACAAGGCAA AAAGCTCAAA TACACCCGTT GTGATAGCAA GCCTGATGAC TTAGCTTTAA TTCAATATAC CGGCGGCACC ACAGGCACGG CCAAAGGAAT ATTGATCACT CATCATAATG TGGTCTATGG CACCAAGCAG TATGATGAAT GGTTTAAGCC GTTAAATTAT GACGCCAATA AAGACGGTCA GTTAACCTCA GTTATTGCCC TTCCGCTGTA TCATATCTTT GCTTTTATTA TCTCTTTACT CGGGTTTCGT ACCGGACAAC ACTTCTTACT TGTCACCAAT CCGCGTGACA TTAACGCCTT TGTCAAATTG CTAAAAAAAG AACCATTTCA TCTACTGCCA GCAGTGAACA CCTTATTCCA AGCACTGTTA AATCATCCTG AATTTAAATC CGTTGATTTT TCAAACTTAA AACTGTCTTT GGCAGGTGGT ATGGCGGCGA CACCTGAAAT GGCACGCAAA TGGCTAGATA CTACTGGCAT CCCCATTCAT GAAGGATGGG GGATGTCAGA GACCCTCGGC GTGGGTACTG CCAATCCTTT AACTAATAAA GAATTTACCG GTACGATTGG TATGCCTGTC CCAGGCGTTG ATATTAAGAT ATTTGATGAT GAAGAAAATG TACTGGGTGT GGGCGAAGAA GGGGAGATTG GCATTAAAGG CATGAATGTC ATTAAAGGCT ATCACAACCT AGATAACAGT AAGTTTTTTA CCAAAGATGG CTATCTGAAA ACAGGCGATG TGGGCGCTAT CGATGACAAA GGCTACGTTA AGCTCTTTGA TAGAAAAAAA GACATGCTCA TTGTCAGCGG CTTTAATGTC TATCCTAATG AAATTGAAGG TGTTGTGGAG ATGCATCCTA AAGTTAGAGA ATGCTCAGTG GTGGGTGTGG AGGATGAACT ACAAGGCCAA TCTGTAAAAT TATTTGTGGT ATCTGACCAC TCAAGCTTAA CCAAAAAAGA GCTCTTTGAA TTTTGTAAAA AGAATCTAGC CGCTTATAAG TGCCCTCGTC ATATTGAGTT TATCGATGAG CTGCCTAAGT CTACAGTAGG TAAAATCTTA AGGCATAAGC TTCGTGCGAA GAGTAATCGT TAG
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Protein sequence | MNKFWTEFYP EGVAKELPPL NQSLNDFFDD TLTKFAKNKF MTNMGVSYTY AEVDQMSKNI AAWIQTLGLA QGSTVGIMMP NVNQYLPIVI GALRAGMVLT LINPLYTSRE LKHQLIDADA KIIFILEPFT HGLDSIIDKT PVETVVVSAI GDMLGTAKGA LINLAAKHLK KAVPNYDLSS CSKCQEVSFK AVLKQGKKLK YTRCDSKPDD LALIQYTGGT TGTAKGILIT HHNVVYGTKQ YDEWFKPLNY DANKDGQLTS VIALPLYHIF AFIISLLGFR TGQHFLLVTN PRDINAFVKL LKKEPFHLLP AVNTLFQALL NHPEFKSVDF SNLKLSLAGG MAATPEMARK WLDTTGIPIH EGWGMSETLG VGTANPLTNK EFTGTIGMPV PGVDIKIFDD EENVLGVGEE GEIGIKGMNV IKGYHNLDNS KFFTKDGYLK TGDVGAIDDK GYVKLFDRKK DMLIVSGFNV YPNEIEGVVE MHPKVRECSV VGVEDELQGQ SVKLFVVSDH SSLTKKELFE FCKKNLAAYK CPRHIEFIDE LPKSTVGKIL RHKLRAKSNR
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