Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1176 |
Symbol | |
ID | 5206912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1436937 |
End bp | 1438670 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599396 |
Product | amine oxidase |
Protein accession | YP_001280075 |
Protein GI | 148652982 |
COG category | [R] General function prediction only |
COG ID | [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT TACAATCCGC CAGCCCCAAT CCCAAAACCG TTGCCATTAT TGGCTCTGGC GTATCAGGCT TGGTTTGTGC TCATTATTTA GTGGCAAGTC ACAAGGTAAC TATCTTTGAG GCCAATGACT ATCTTGGCGG GCATGTAAAT ACCATTGACG TTGCTCTAAC AACACCGCGA AAGCTAAAAA AAGATGAGAT TGAAACCGCT GCGATTGATA CCGGTTTTAT TGTGTTTAAC GAGCGTACGT ATCCTAATTT TTTTAGGCTG TTAGATGAGT TAGACGTCCC GTTTCAAAAG ACGGACATGA GCTTTTCGGT CAAAAACCCT GCGATTAATT TTGAGTACAA TGGTCACACC TTAAATAGCT TGGTGTCGCA GCGTAAAAAC TTAATTAGTC CGAAGTTTTG GCGTTTTGCA AAAGACATTA TTGCCTTTAA TAAACACATA AAACAGCGAC ATCAAGCGTA TAAGGCGCTG CGTCAAGCCA TTGATCAGTT GACCTTAGCT GCTGAGCAAC TGAATGCGCA AAACAAACTT ACTAAGCGCA AAGCCCAGAG GCTGCAAGAG CAATTGGCCA ATAAAAATAA GGCGCTTGAG ACGCTCAGTC AAGAGACACT AGGGGACTAT TTATCCGAGC AAAAATACAG CCAACTATTC CAACAAAACT ATCTACTGCC CATGGTGTCT GCCATTTGGT CTATGCAGAT TGAGCGCTCT AAATCGTTTC CACTGATATT TTTCGCTCAA TTTTTTGACA ATCATGGCCT GCTCGATATT ATCAATCGCC CACAGTGGTT CACGATCAAA GGCGGCTCGA AGCAATATGT CAATAAGTTG ATTGAACGCT ATGCCAACTT AGGCGGTAAT GCGCTGGTTA ATAGCCCTGT GCAATCGATT ACTCGCCAAA CCCATGGCAA TAAAACCGAT GGCCATAAAA ACAGCATCAC CATCCACTAT AAAGACGCTA AAGGAGTTAG TAAATCAGCG AGCTTTGATG AGGTGATTGT TGCCTGCCAT GCAGATGTAG CAAAGCGCCT GCTGGCCGAC ATCAATGAGC AAGAATCTCA AATACTGGGC GCATTTTCTT TTATCGATAA TGAGGCCATT TTGCATACAG ACACAAGCGT ACTGCCAAAA AAGCCATTGG CATGGGCCAG CTGGAATTAT TTATTACCCA GCACCAATCA GCAACTACAG CACTCTCAAG CACCAGCCAG CCAATCATTA GGCGACAACC ATTCATTACA CAGTGAGTTG AATGGGTTAG ATGAGCTAAA GCCGGTCTTA ACGTACCACA TGAATATCCT TCAGCGACTG GATAAGCATC ACAACTATCT TGTGACCCTC AACGAGCAAA TAGACACAGC GCAGGTGATA AAGCGTATTG ATTATCGTCA TCCTATTTAT GATATCAAGA TGACACTGGC ACAAAAGCAG TGGCACCGTC TTGCCAGCCA AGACAACCAC ACCCACTTTT GCGGTGCGTA TTGGTTTAGC GGCTTTCATG AAGACGGCGT GAGAAGTGGT CTAAGGGTGT GCCAACATTT AGGGGTTAAC ATTGAGCTTC TCGATGCTAT TAATCCGGCT CATTTAGATA AAGTGATTGA GCCTAACCCC ACCTTTAATA ATAGTGTCCT GCCGATTAAG GCCGATAAAA ACCAGGCCAG ACTAAGTCAG CGCCAGCTGA TATCCGCCTC TACTAATACG TCATTAAACG AGGTGTTTCA ATAA
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Protein sequence | MTQLQSASPN PKTVAIIGSG VSGLVCAHYL VASHKVTIFE ANDYLGGHVN TIDVALTTPR KLKKDEIETA AIDTGFIVFN ERTYPNFFRL LDELDVPFQK TDMSFSVKNP AINFEYNGHT LNSLVSQRKN LISPKFWRFA KDIIAFNKHI KQRHQAYKAL RQAIDQLTLA AEQLNAQNKL TKRKAQRLQE QLANKNKALE TLSQETLGDY LSEQKYSQLF QQNYLLPMVS AIWSMQIERS KSFPLIFFAQ FFDNHGLLDI INRPQWFTIK GGSKQYVNKL IERYANLGGN ALVNSPVQSI TRQTHGNKTD GHKNSITIHY KDAKGVSKSA SFDEVIVACH ADVAKRLLAD INEQESQILG AFSFIDNEAI LHTDTSVLPK KPLAWASWNY LLPSTNQQLQ HSQAPASQSL GDNHSLHSEL NGLDELKPVL TYHMNILQRL DKHHNYLVTL NEQIDTAQVI KRIDYRHPIY DIKMTLAQKQ WHRLASQDNH THFCGAYWFS GFHEDGVRSG LRVCQHLGVN IELLDAINPA HLDKVIEPNP TFNNSVLPIK ADKNQARLSQ RQLISASTNT SLNEVFQ
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