Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1104 |
Symbol | |
ID | 5206104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1353210 |
End bp | 1355294 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640599325 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_001280004 |
Protein GI | 148652911 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAATA GTAATCAGAA CAAAGACAAT AGCAATAGCC ATCTCCCTAA ACGCTCAACG CAAGCGGCTA CAGACAGGCC AGTTGCAGTC TCCTCCTTGG CTTCGGCAGT AGAGGTCAAA CACTGGCGGG CATGGGTCTT GATACTGATA CTGTTAGCGG CTATTGCCAT CAGCAGTTCG GTATTGATTG ACAGGCTTTG GGAGCTACCA GTTAGCCAGC TGTTTAAGTC AAGCTTTACA CTTGATGTGG CGGATATGGC GGTGCAGTTA AAGCTGGTCG CTACCAGCGT GGTGGCCTTA TTGGCTGGAG GGCTACTGGG GGTGGTCAGT GTGTTATTAC AACAACTGGT CAAAAACCCT TTGGCCTCTG ATACCACCTT GGCCATTGGC ACTGGCGCTC AATTGGCGCT GCTTATTGCG ACCTTATTTG TGCCAAGTTT AGCCATTTAT GGTGGGGTAT GGATTGCCTT TGTCGGGGCG CTGTTTAGTT TGGTATTGGT ATTTAGCTTA TCAGCGCCCA GCCGTTTTAA TCCACTAATC TTAGTGTTAG CCGGACTGGT GGTAAATATT TTACTGGCTT CATTTGCCAG CACTTTGGTG TTGTTTTTTA CTGAGCATAG CGTCGGTATT TTGTCATGGG CGGCTGGGTT TTTAACGCAA AATAATTGGC ATACCACGGT TAAGCTTGCC GTAACGGCCA TAGCACTGGC GGCGATAAGT ATCCCCTTAT TAAAGCCGTT AACCCTAATG AGCCTAGATG ATATGCAAGC CAAACGGCTG GGCGTACCTA TTAATGCCTT ACGTTTAGCG GTCATTGCTA TCGTGGCTAT CGTATCGGCG CTGGTGGTCA GTGAGGTGGG CTTGATTGGG TTTATCGGCT TGGCGGCAGC AAGTTTGGTG AATGCCTTGG GTATTGGCTC TATCGGGCGC AGATTGGTAG CGGCCTTTGG CTTTGGCGCT TTATTGCTGT GGTTGACCAG TAATGTGGCG CTGCTATTAG AGCCGGTGAT GGGGACGCCG ATACCGGCAG GCTCTATCAC TGGCGTGTTG GGTGCCCCGC TGATTATTTG GCTGATTTTA CGTCAAAGAC GCCAAGGCGT GACGCCCATT ACGCCGATGT TCACGCCCCA GCGTAAAGCC ATCAACTGGT GGCGGTGGAG CGTGGGCGTA CTGCTACTTA TTGCTTTAGT TAGTGTATGG GTCAAAGACC TCTCAGGCAT TGCCTTTAGT ACAGATTGGG CGCTAACCCA GCAATACCGA TTGCCGCGCA CGCTAAGTGC TGCTGCTACC GGTGTCATGC TGGCTACCGC CGGGGTGTTG CTACAGACCT TGACTCGCAA CCCCATGGCC AGCCCGGAAG TACTGGGCAT TAGCTCTGGG GCTGCATTGG GAGTCATTGG TGGCTTTTTA TTGTTGCCCG CTTTTGGGAT AAAAGCTGGT GCCCTAAGCT TGGTTGGCTC AGGGCTGGCA GGGGCGTTTT TGGTGCTATT ACTGATTATT TGGTTGGCGC GTAAAGTCAC GCCAGCTTAC TTACTGCTGG TCGGTATCGG GATTGCCGCT ATGATGGATG GCATCATGAG TATGGTCAAG CTGTCAGGTG ACCCAAGACT TGAGGCCATG CTGAGCTGGC TATCGGGCAC CACGTATAGC GCCAGCCCTG AGACGGTCTG GTACCTGATG ATAGCAGCAG CGGGACTGGT GGCACTTAGT ATGTTATTGA TTAAGCCGCT AAGGGTGCTG GGATTAGGTG AGTCGGTGGC CAAAAGCTTG GGCGTTAAGG TGAGATTTTA TCAATTGGCG CTACTGATCG TGGTGGCAGC CCTGAGTACA GTCAGCACAT TGGCGGTGGG TCCGCTCAGC TTTATTGGGC TGATGGTGCC GCATTTGGCC ACTTCTTTAG GGGCAGTGCA GCTTGAGAAG CAGCTGCCAT TAGCAGCACT TCTGGGCGCG GGGGTGATGG TCTTAGCGGA TTGGATTGGC CGCTATATCA TCTTCCCTTA TGAGCTGCCG GCAGGCACCA TAGCCGCTAT CATTGGGGGA CTGTACTTTA TATGGCTCAT TCGGCGCAGT TCGGTTCATC AGTAA
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Protein sequence | MPNSNQNKDN SNSHLPKRST QAATDRPVAV SSLASAVEVK HWRAWVLILI LLAAIAISSS VLIDRLWELP VSQLFKSSFT LDVADMAVQL KLVATSVVAL LAGGLLGVVS VLLQQLVKNP LASDTTLAIG TGAQLALLIA TLFVPSLAIY GGVWIAFVGA LFSLVLVFSL SAPSRFNPLI LVLAGLVVNI LLASFASTLV LFFTEHSVGI LSWAAGFLTQ NNWHTTVKLA VTAIALAAIS IPLLKPLTLM SLDDMQAKRL GVPINALRLA VIAIVAIVSA LVVSEVGLIG FIGLAAASLV NALGIGSIGR RLVAAFGFGA LLLWLTSNVA LLLEPVMGTP IPAGSITGVL GAPLIIWLIL RQRRQGVTPI TPMFTPQRKA INWWRWSVGV LLLIALVSVW VKDLSGIAFS TDWALTQQYR LPRTLSAAAT GVMLATAGVL LQTLTRNPMA SPEVLGISSG AALGVIGGFL LLPAFGIKAG ALSLVGSGLA GAFLVLLLII WLARKVTPAY LLLVGIGIAA MMDGIMSMVK LSGDPRLEAM LSWLSGTTYS ASPETVWYLM IAAAGLVALS MLLIKPLRVL GLGESVAKSL GVKVRFYQLA LLIVVAALST VSTLAVGPLS FIGLMVPHLA TSLGAVQLEK QLPLAALLGA GVMVLADWIG RYIIFPYELP AGTIAAIIGG LYFIWLIRRS SVHQ
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