| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1099 |
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| Symbol | |
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| ID | 5204729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1343891 |
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| End bp | 1347931 |
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| Gene Length | 4041 bp |
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| Protein Length | 1346 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599320 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001279999 |
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| Protein GI | 148652906 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00011196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGA TTGAATTACG ACTCAAAAAC CTAAACTCTC TAAAGGGCGA ATGGCGCATC
GACTTTAGCG ATGAAGCCTA TATCAACGAA GGTATTTTTG CCATTATTGG GCACACAGGC
GCAGGCAAGA CCACCATTTT GGATGCCATT TGCTTAGCGC TATATGGAGA AACACCGCGG
ATCAGTAACA TTAGTAAATC GACCAATGAG GTGATGACTC GCCAAACTGG GGAGTGTCTG
GCCGAAGTGG TGATTGATAT AAATGGCACA CATTACCGCT GTCATTGGTA TCAGCGCCGT
GCCCATGGTA AGCCTGACGG TAACTTGCAA GACGCCACCC ATGAGCTGTC CCTTGCCAGC
GATCATGAGG GACAAAAAGC CGGTACGGTT CTTGAAGAAA AATCATCGCT GACCAAAAAG
CGAATTGTTG AATTAACCCG CATGGACTTT CAGCAATTCA CCCGCTCCAT CTTATTGGCT
CAGGGCAGCT TTGCGGCATT TTTAAGCGCC AAAGCCGACG AGCGTGCCGA CATCTTAGAG
AAGATAACCG GCACCGATAT TTATGCCACC ATCTCTGAGC GGGTGCACGA AAAAAAACGA
CAAGAAGAAG CCCTTCTTAA TACCTTGCAG ACCAAGCTTC AGGGGCTAGA GTTGCTCGAT
GTAGAGGCCG AGACCCAACT CAAGCAACAG CTCGAGGCCA ATACCAAACA ACTGACAGAT
CACCGCGCCA TCGTTAGCCA ATTAGAGGAT CAATTAACAT GGATCACTGA GGTTGAGCAG
CTTACAGAGC AAGTGGTGAC GCTTAACGCC GATGTGGCGG TATCCATACA AGCAAAAACA
GCCTTTGAAG AGGATGCAAA ACGTCTAGAG CGTGCCAATA AGGCGTTAGA GATTGAAAGT
CACTATACAC AAGTGTGTAA TCTGCGCGCC TCAAAACATC AGCTGGATCA AGAGCTGTCT
AATAAACAGC AGCAAATCCC TGTCTTACAG CAGCAGCTTG ATGAGCAGCA AACACAAATG
ACTCAGGCAC AAAAGCGTGA AGCATCAGCT AACCAAGTCT TGAATGACAC GCTCCCTGTG
ATTGAACAGA CGCGCCAGCT GGATAATCAA ATTGAACAAA CGCAGCTTAC CCTAAAGCAG
CAGCAACAAT TACAGCACAC CCATCAGCAA AGCTTGGCCG AATTCAAGGC AACAATAACA
CGCCTTATAT CAGATAAAAG CCAAACCCAG CAGCAGCTGG CTGAGGTTGA CAGCTACCTA
CAGCAGTACC AGCACCACAG CCAGCTAAAT GTGGATATAA GTGGCTTAAA TACCCTCGGC
TTAACTCTCA AAGCTGAGCT TGAAAATAAC TATAAGCTGT ATCAGCAGCA GCACTTAAAA
GAGCAAGAAA ATAAGGATCT GACCCAACAA TTAAACGCCC TAAAGCAAGA ACAGGCCACG
AACCAGGCCC TTTATGAGAC AAAACAAGCC AAGTTAAATG AGTTATATCA CGCGCAGCAA
GCCTTGTTAC AGGGTCAGCC TTTGGCGGCA CTTCGTCAGC AGCAAGAGCA CAGTGATGCC
TTGAGCACGC AGCTGTCCAT ACTACAGCAG CACCTTGATA ATAAAGCTGA ATTGGCCACT
CAAATCAGCG CTGAAAAGGC AGTCACCACT CAGTTTGACT CAGATATGGC TGACCTAAAA
AGCGTCATTG AACAGGCTGA GCAAGATCTT GAGATGCTAA ACTGTCATCA GCAGGACAAA
CAATCTCAAG TAGAACAACA ACAAAAAATC ATTGAGCTGG AGGCCAAGCT TGAGGATTAT
ATCGAGCTGT TAGCCCATAA TCAGCCCTGT CCACTGTGTG GCTCTACCGA ACACCCTAGT
GTTGCTAACA AAAAATCTAA TTCATCTGAG GCTCATACCA AGCTCCATCA ATTAAAAGAT
GAGCTGTCTC AAATAGTCGC TAAAATTAAT CGTGCCAAGC AAAATTTGGA CGACGCCAAG
CTGGCTTATA AAAACACTGA GTATAAGCAG CAACAAAGCC ACGCTCAGCT GACAAACCAG
CTACAGCGAC TTAATACAAC ACTAAGCCAG ATACTAAGCC ATGCTAATAC GTTATCTGAG
CAATTAAGTG CTGCCCCCAC CGTGCTGCAA CAGCAGTTAC TAAATAGCAG CGCTCACCTT
CATGAAACCG ATCCTCAAAG CAGCCATCCA AAAAATCATC AAAACGACCA GCAGCCAGCG
GCGCCTAAGC CGGCTCTCTT GTTAAAGCTA TCGCAGCTAA CAGCAGGTTT TGACAGTCAG
CCAAGCCAGC AGCAGCTTGA GGCTTTACTA GCCAAGGGCA AGCAAATTAC AGCGTGTATT
TATGACGCAC AGCAGCGATT ACACCATCAA AAACAGCAGA TTAAGCAGTC TTTAGAGGAA
CAAGATGCGC TGACCCAGCA GATAACAGAT ATCGAGAAGC GGCATAAAGT AATAGAGGCT
GATAACCAAA GGCTAATGAT GCACATCAAG GACATTGAAG CCAAGCAGCA GCTTAACCAG
CATAGTATCA CTCAAGCTAC AGCCTTTATA GATCAAGGTT TTAGTAAGCT TGGTGAGAGC
GCCCAACAGC TGCAAGGTTT GCTAGATAAG TATAAAGACA GTGCGGCGAT TAATGACGCC
TCACAGACCC TTACTGATTG CGAGCAGTCA CTGGCTCAGC TTAGACACTG TATGAATAAC
CAGCAACACT TAGATGACAA GCAGTGCTAT GACTCATTAC AGCCGCTACG CAATCTTAGT
CAATGGATGG GTGCGCTCAA TAACAGCTAT GTAGCCAAGC TGGCCTCCAA GCAGCAGCTC
TTCACTGAGA TTCAAACATT AGACACACAG CTTAAAAGCA ATCAGGCTCA GGCAGACAAA
GAACACAGCC AGCTTGCGCT ATTGACTGAC ACCATCCATC AGCTGTCACA TGAGATGACT
CAGCTGCAAA GCCGCCGCCG TGATTTATTT GGTGATAAGC AAGTCAATAG CGAAGACAGC
AGATTGCGTG CCGCGCTTGA TAGTGCCAAA GACCAGCTTA ACCAAATAAA TAAAGAGCAC
AGCCATACGC AGCATCAATT AAGCACGCTT CAAGCAGAAA GCCTACGCCT TGAGGCTCAG
CTGTCTGAAT TACAAAGTCA ACTTGCTCAG CAAGAGCACG CGCTAAGTAC GCAGCTTGTT
GCCCATGATT TTGATTCTGA GGCCGATTAT TTGGCCGCTC GCCTGCCCAA AGAACAGCGT
GATGCGCTCA ATCAACGACA GCAAGAGATT GTTAATGCCC TAAATTATGC CCAAAATGCT
TTAAAAACGG TTGAACATCA GCTACAGCAT AAAACGGCTA ATCCGCAAAC CACAGACACC
AAAGAAAATC TACAGGCTCA GCGGCAACAG CAACAAGACT TGGTCGATGA GCTTATCGAA
CAGGTGGGCG GCATCAATCA ACAGCTACAA ACCAATGAGG CGCGAAAAAC AGATCAGCGC
TCCCAACTTG AGAAGATAGC TGAGCAAAAA CAAAAGCTTA AAGTCTGGCA AGAGCTCTAT
GGCTTAATTG GCTCTGCCGA TGGTAAAAAA TACCGCACCT TCGCTCAAGG GCTCACCTTT
GAGATTATGG TCAGCAACGC CAATACTCAG CTGCGCAAAA TGAGTGACCG ATACATACTG
GTACGTGACG AGAACAGTCC GCTTGAGCTT AACGTTATTG ATGACTATCA AGGCGGATTG
ATACGCAGTA CCAAAAACTT ATCGGGCGGT GAAGGCTTCT TAATCAGTCT GGCTTTGGCA
CTGGGGTTAT CGAGTATGGC CAGCCAAAAC ATTCGAGTCG ACTCGCTGTT CTTGGATGAA
GGCTTTGGTA CACTTGATGA GGACTCGCTG GATGTGGCGC TCAATACGCT GACCAACTTG
CAGCAAGAAG GCAAGCTGAT TGGGATTATC TCACATGTGC AAGCGCTTAA AGATAGAATT
CACACCCAAA TTAGAGTGGA TAAACTCTCA GGCGGATATA GTAAACTCAG CGGTCCTGGC
TGTTCGGCGG TTAAGGATTA A
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| Protein sequence | MRLIELRLKN LNSLKGEWRI DFSDEAYINE GIFAIIGHTG AGKTTILDAI CLALYGETPR
ISNISKSTNE VMTRQTGECL AEVVIDINGT HYRCHWYQRR AHGKPDGNLQ DATHELSLAS
DHEGQKAGTV LEEKSSLTKK RIVELTRMDF QQFTRSILLA QGSFAAFLSA KADERADILE
KITGTDIYAT ISERVHEKKR QEEALLNTLQ TKLQGLELLD VEAETQLKQQ LEANTKQLTD
HRAIVSQLED QLTWITEVEQ LTEQVVTLNA DVAVSIQAKT AFEEDAKRLE RANKALEIES
HYTQVCNLRA SKHQLDQELS NKQQQIPVLQ QQLDEQQTQM TQAQKREASA NQVLNDTLPV
IEQTRQLDNQ IEQTQLTLKQ QQQLQHTHQQ SLAEFKATIT RLISDKSQTQ QQLAEVDSYL
QQYQHHSQLN VDISGLNTLG LTLKAELENN YKLYQQQHLK EQENKDLTQQ LNALKQEQAT
NQALYETKQA KLNELYHAQQ ALLQGQPLAA LRQQQEHSDA LSTQLSILQQ HLDNKAELAT
QISAEKAVTT QFDSDMADLK SVIEQAEQDL EMLNCHQQDK QSQVEQQQKI IELEAKLEDY
IELLAHNQPC PLCGSTEHPS VANKKSNSSE AHTKLHQLKD ELSQIVAKIN RAKQNLDDAK
LAYKNTEYKQ QQSHAQLTNQ LQRLNTTLSQ ILSHANTLSE QLSAAPTVLQ QQLLNSSAHL
HETDPQSSHP KNHQNDQQPA APKPALLLKL SQLTAGFDSQ PSQQQLEALL AKGKQITACI
YDAQQRLHHQ KQQIKQSLEE QDALTQQITD IEKRHKVIEA DNQRLMMHIK DIEAKQQLNQ
HSITQATAFI DQGFSKLGES AQQLQGLLDK YKDSAAINDA SQTLTDCEQS LAQLRHCMNN
QQHLDDKQCY DSLQPLRNLS QWMGALNNSY VAKLASKQQL FTEIQTLDTQ LKSNQAQADK
EHSQLALLTD TIHQLSHEMT QLQSRRRDLF GDKQVNSEDS RLRAALDSAK DQLNQINKEH
SHTQHQLSTL QAESLRLEAQ LSELQSQLAQ QEHALSTQLV AHDFDSEADY LAARLPKEQR
DALNQRQQEI VNALNYAQNA LKTVEHQLQH KTANPQTTDT KENLQAQRQQ QQDLVDELIE
QVGGINQQLQ TNEARKTDQR SQLEKIAEQK QKLKVWQELY GLIGSADGKK YRTFAQGLTF
EIMVSNANTQ LRKMSDRYIL VRDENSPLEL NVIDDYQGGL IRSTKNLSGG EGFLISLALA
LGLSSMASQN IRVDSLFLDE GFGTLDEDSL DVALNTLTNL QQEGKLIGII SHVQALKDRI
HTQIRVDKLS GGYSKLSGPG CSAVKD
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