| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1063 |
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| Symbol | potC |
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| ID | 5205314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1283349 |
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| End bp | 1284125 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640599284 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_001279963 |
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| Protein GI | 148652870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000694719 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAGTT CAATGAAGTG GCTGTCTCGC CTCTATTTAA CCCTAATGTA TTTGATTATG
TTTGCGCCAA TTATGGTCAT GGTGGTGTTC TCATTTAACG CCTCCAAGAT TGGTTATCAC
TGGGGCGGCT TTAGTTTACA TTGGTATCAT GAGTTGTTTA GCAATGAGGC TATGATTCAA
GCGGCCATTA ATTCAGTGTT GTTGGCAGTG GTTGCGGCGA CGGTTACCAC AGTGATTGGC
GGGCTTACCG CATTGTCTTT TCAGCGTTAT GACTTTAAGG GTAAAAGCGT ACTGCAAAGC
TTATTGTTTG TGCTGATGAT GTCGCCTGAG ATTGTGCTGG CCATCTCGCT ATTGGCACTG
TTTTTAATCA TAGGTATTGA GCTGGGCTTT ATAACCTTGT TATTAGCGCA CATTACCTTT
TGTCTGCCTT TTGTGGTGAT TACCGTATCA GCCCGATTAT CGAGTATGGA CAATAGTGTA
TTGGAAGCCG CCCGTGACTT GGGTGCCAGT GAATTTACTA TGATTCGTAC GGTACTGTTG
CCCATTATCC TGCCTGCGGT ATTGGCCGGC TGGGTATTGG CCTTTACTTT ATCGCTGGAT
GATGTGGTGG TGTCTACCTT CAATACTGGT GCCAACTTTG AGATTTTACC GCTACAAATT
TATTCTATGG TGCGGGTCGG GGTGAAGCCT GAGGTCAATG CGGTGGGTAC CTTATTATTG
GCCATTTCAC TGGTGGGCTT GGTCATCTCT CAATTACTAC TTCTTAAAAA ACGTTAA
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| Protein sequence | MSSSMKWLSR LYLTLMYLIM FAPIMVMVVF SFNASKIGYH WGGFSLHWYH ELFSNEAMIQ
AAINSVLLAV VAATVTTVIG GLTALSFQRY DFKGKSVLQS LLFVLMMSPE IVLAISLLAL
FLIIGIELGF ITLLLAHITF CLPFVVITVS ARLSSMDNSV LEAARDLGAS EFTMIRTVLL
PIILPAVLAG WVLAFTLSLD DVVVSTFNTG ANFEILPLQI YSMVRVGVKP EVNAVGTLLL
AISLVGLVIS QLLLLKKR
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