Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1040 |
Symbol | |
ID | 5205969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1247267 |
End bp | 1248385 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599261 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_001279940 |
Protein GI | 148652847 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.53626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT TATTTGACAA CCCTATGGGT CTTCGTGGTT TTGACTTCGT AGAGTTTGCC TCTCCTGAGC CTGCATTGGT GGCAGAGCTT TTTGAAAAAT TAGGCTTTAC CCATGTGGCC AACCACAGAT CCAAAGACGT GGCCTTGTAT CGTCAAGGCG ATATCAACCT TATTTTAAAC CGAGAGCCGA GAAGTCAAGC CAGCTACTTC GTTGAAGAGC ATGGTCCAGG TGCTTGTAGC ATGGGCTTTC GAGTGGCTGA CTCTCGACAA GCTTATAAGC GTGCCATCGA GCAAGGTGCA CAGCCTGTTG AGATACCCAC TGGGGTTATG GAGCTTAAGT TGCCAGCCAT TAAAGGCATT GGCGGCTCGC TTATCTATCT GATTGACCGC TTTGAGGAAG GTAGCTCTAT TTATGATGTA GATTTTGAGT TTTTACCGGG TGTGGACAAG CATCCTAAAG GCTTTGGCTT TAAGGTTATC GACCATTTAA CTCATAACGT CTATCGTGGT CGTATGGCGT ATTGGGCCGA CTTCTATGAG CGTATCTTTA ATTTTCGTGA AATTCGCTAC TTTGATATCA AAGGCGAATA CACCGGCCTA ACCAGCAAGG CCATGACGGC GCCTGATGGT AAAATCCGCA TTCCGCTCAA TGAAGAAGCA CGTCAAGGTG GCGGCCAGAT TGAAGAGTAT CTCATGCAGT TTAATGGCGA GGGTATTCAG CACATTGCGC TACTAAGTGA TGACTTATTG GCCAGTATCG ATCAGCTAAA AGCGGCCGGC ATTCCGCTAA TGACAGCGCC CAATGATACC TATTACAAAA TGCTTGATGA GCGTCTACCT GGGCATGGCG AGACAGTCTC AGAGCTACAG ACCCGAGGCA TCTTACTCGA TGGCACCACA GAGGGCGGCA CGCCAAGACT GCTGTTACAA ATTTTCTCTG AGACCATTTT AGGCAGCCCG GTGTTCTTTG AGTTTATCCA GCGCAAAGGC GATTATGAAG AAGGCTTCGG CGAGGGTAAC TTCAAGGCGT TGTTTGAGTC TATTGAGCGT GACCAGCTGC GCCGCGGTAC CATTGATGCT GATGGGGCCT CAGACAAAGA TACGGCCACT GCAGTTTAA
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Protein sequence | MADLFDNPMG LRGFDFVEFA SPEPALVAEL FEKLGFTHVA NHRSKDVALY RQGDINLILN REPRSQASYF VEEHGPGACS MGFRVADSRQ AYKRAIEQGA QPVEIPTGVM ELKLPAIKGI GGSLIYLIDR FEEGSSIYDV DFEFLPGVDK HPKGFGFKVI DHLTHNVYRG RMAYWADFYE RIFNFREIRY FDIKGEYTGL TSKAMTAPDG KIRIPLNEEA RQGGGQIEEY LMQFNGEGIQ HIALLSDDLL ASIDQLKAAG IPLMTAPNDT YYKMLDERLP GHGETVSELQ TRGILLDGTT EGGTPRLLLQ IFSETILGSP VFFEFIQRKG DYEEGFGEGN FKALFESIER DQLRRGTIDA DGASDKDTAT AV
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