Gene PsycPRwf_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1018 
Symbol 
ID5206556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1211057 
End bp1211545 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID640599239 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001279918 
Protein GI148652825 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000336802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00248451 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTCAT TCTCAAATAT TTCCCCAGCC ATCGATATTG ACGCCATTGA TCGGCAGATT 
TTAACCCTAC TACAACAAGA TGCCCGCATG AGCATTACCG ATATTGCTGA AGCGGTGCAT
TTATCGGCTA CCCCTTGTGC CAGAAGGATT AAGCGTTTAG AGGAAGCGGG TGTTATCACC
GGCTACCATA CTTTGGTTGA TCCGCAGAAG CTTGGTTATA GCCTGGCTAT TTTTATTGCG
GTGAGTATGG ACCGACATAC TGCTGAGCGC TTTGCTGAGT TTGAAGCTAA AATCCAAAGC
TTCGATGAGG TGGTCAGCTG CAGCATTGTC ACCGGCCGTA CTGAAGATTA TTTATTAAAG
GTGGTGGTGC GTGATATGGC GCATTATGAG GAGTTTTTAT TGCACCGATT AAACCGCCTA
GAGGGTGTCA GTCAAGTGCA TACCAGCTTT GAGCTGCGTG AGGTATTTAA TCGCGGCATC
ATTAGATAG
 
Protein sequence
MSSFSNISPA IDIDAIDRQI LTLLQQDARM SITDIAEAVH LSATPCARRI KRLEEAGVIT 
GYHTLVDPQK LGYSLAIFIA VSMDRHTAER FAEFEAKIQS FDEVVSCSIV TGRTEDYLLK
VVVRDMAHYE EFLLHRLNRL EGVSQVHTSF ELREVFNRGI IR