Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1016 |
Symbol | |
ID | 5206554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1209526 |
End bp | 1210200 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640599237 |
Product | hypothetical protein |
Protein accession | YP_001279916 |
Protein GI | 148652823 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000115286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00109091 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATAACTA GGTTACCTCT TTGGATTTTG ATTGGTGGGG CAGTGCTGGC TTTTAGTGCC GGCTGCATCA ATATTATTGC GCTTAGCGGC TTTACCAATT TATCGGTGTC GCATGTGACC GGCAACGTCA GTTATTTTTC GGCAGCGTTG GCGCAGATGA ATTTTTCGCG GGTGCTGTTC GTGGGGGCAT CGCTGCTGTC ATTCTTGTCA GGCTCGATTT TAAGCGGCTA TCTGATTGGC CAGCACTCGT TAAAGCTTGG CCGCCGTTAT GGCATTGCCT TATTCACCGA AGCTGGCTTA TTGTTTTGCA GCTTTTTACT GTTTTTTCAC CATGATTATT TCGGTCAGCT GCTGGCGGCT ATGGCTTGCG GGCTACAGAA TGCCATGGTA GCCACCTACA GTGGAGCGGT TATTCGCACC ACGCATTTGA CCGGTCTGAC CTCAGACATG GGGGCCGCTA TTGGTAACTG GTTGGCAGGT CGACCGATTA GCAAGCTAAC CTTGGGCTTC CAGGCCATCA TCTGGTACAG CTTCTGTGGC GGCGGTGTGG TAGGGGCTTA TGGGTTTTTT AAATTGGGCT ATAGCGCCAT GCTTATTCCG GTTGGCATTG TGTTTATGGC AGCCGTCTTC TATCAAGTGG CCTCAAGTCG TCTGCCTGAA AAGCGCGAAA CATAA
|
Protein sequence | MITRLPLWIL IGGAVLAFSA GCINIIALSG FTNLSVSHVT GNVSYFSAAL AQMNFSRVLF VGASLLSFLS GSILSGYLIG QHSLKLGRRY GIALFTEAGL LFCSFLLFFH HDYFGQLLAA MACGLQNAMV ATYSGAVIRT THLTGLTSDM GAAIGNWLAG RPISKLTLGF QAIIWYSFCG GGVVGAYGFF KLGYSAMLIP VGIVFMAAVF YQVASSRLPE KRET
|
| |