Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0930 |
Symbol | |
ID | 5206239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1113095 |
End bp | 1113802 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599149 |
Product | nitroreductase |
Protein accession | YP_001279830 |
Protein GI | 148652737 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00302341 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAT ATAAAGGGAT AGGATATAAA AAATCAGAGG ATATTATGAT GAATAACACC CTGCAGGACG AGTTTGAAAC CAGCGATCAA CGGGCGGATG CGACGCAAAT ACAGTCGGCT AAGGTGAGTG ATGAGCAAGT TATCAACTGG ATTAAATCTC GCCGCAGTAT TGGCAATTTA AGTATTCCTG CGCCCACGAA GCGGCAGCTT GAGGCCGCCA TTGAATGTGC CATGAGCGCC CCAGATCATA AGAAGCTACA GCCTTGGCGC TTTACCGTTA CTCAAGGGCA GGCAAGACAT GAGTTAGGCC GAGCCTTATT GGCAGCAGCA CAGGCTAAAG CTTTGCGTGA GGGCAGTGAG CTTGATGAAC GTAGCGCAGA GAAAACCTTA AAAATGCCGC TGCGGGCGCC CGTTATTATC ACGGTAGTGA CACGGATGAG ATATCATGAA AAAGTGCCTG CCTTTGAGCA GCTATTAAGT AGTGGCGCCG CTGTACAAAA TCTTATCTTG GCACTGCAAG CTCAAGGCTT TAGCACGGTT TGGCGTACGG GGCCTTTGGC CAATGAGCCT GCCGTAAAAA GCTACTTTAA TGTGGGTGCA GAAGATTATA TAACCGCCTT TGTCTATGTG GGCAGCAGCC ACTGTGCCAT GCCTGCCCGC GGTGACATTG ATACCCAAGG CTTTGTGACT TATCAAAACG GATTATAA
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Protein sequence | MPIYKGIGYK KSEDIMMNNT LQDEFETSDQ RADATQIQSA KVSDEQVINW IKSRRSIGNL SIPAPTKRQL EAAIECAMSA PDHKKLQPWR FTVTQGQARH ELGRALLAAA QAKALREGSE LDERSAEKTL KMPLRAPVII TVVTRMRYHE KVPAFEQLLS SGAAVQNLIL ALQAQGFSTV WRTGPLANEP AVKSYFNVGA EDYITAFVYV GSSHCAMPAR GDIDTQGFVT YQNGL
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