Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0924 |
Symbol | |
ID | 5205089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1104174 |
End bp | 1106705 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599143 |
Product | hypothetical protein |
Protein accession | YP_001279824 |
Protein GI | 148652731 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTTT TTATGCAAAA AAAATTTATT GTGGCACGAT TAACTCTAAA CTTAGCCTTA ACCGCCGGTC TATTGACAGC AGTAGGATGT AGCACCGTAT CTGTTGACAA AAAAAACTCC AGTCAGACCA TTGTAAAAAA GCGCAGTAAT GTGGTCACCA CAAACGCTTT AAGCAGTAAG AGCGCTTCGG TCTTGGTCTC TATAGGTGTG CCGGCTAGAG AATGCTTACC AAAGTTTGAT GAGTGTCTAC AAAAGATTGA TGCCGGCTTA TTCAACAAAG ACTCTAAAGA AGCCCTAGCG CTATATGCTG AGCTATCCCT GGCCAAAGCC AAAGAGATTT CGGCATTAGA GGACTGTGTT GAGAAGATTT TACGACCACC TATTGATACT TATTATGCCA ATGCACCAAA TACCCCTGAG CAAGAACAAC AAAGAATAAG CTACTTAAGA CAGTGCAATA CTGACTATCG CAATAACTTA TTAAGCGCGA TAAAGTACAG CTATGCCTAT TTATTCTATA ATCAGCTAAA TCCTGAAGCC GCTAATGCTG CTAACATGGC GGTAAAACCC AATAACCTAC CCTCCAATTT AGACATTCAA ACTCAAGATG TCTATGAGGC GGCCTCAGAT GCCCTTATAA AACAGCTGTA TTCCAACAAA GACCACAGCC AGCAAATCGC TAAAATGACG TCTTTTATTA GCTCTGATTT AATTGATGAT GCTAAATTGT CTATGAATAC GGGTGCTCAA TATGCCAATG GCATTAAATA TGGCGATCAA ATTAAAGTCT TAAACTTCAC CTTCCCGCCC ATTGAGCAAG ACCTTAATAC CGATACTGAC AATCAGGATT TGAAGCACAC ACAACAGACA GATTCAACCA AGCAGCTCAG TAAAGACTTA AATTTAGTAG AGACCTCTAT CGACTTATAT CTGCCTAATG AGCCTGAGTA TTTACAAAAC ACCACCCGCT ATAACAAAAG CATAGATAAA TTGTATGCCA GCCATGACCT AAGCTTTTCG GGGCTAAACA CCATCAGTGA GCGTGAAGGC TTTGGGATTA GCTATGTCAC TTTATTTGAT GATCGCTTAA ATACGTCAGT GACCAATCTG ATTAAGTCTG ATAACAAAAC CTTAAACTCT GAGGATCCAT TAGACCGCAT CCATTTAACC GGTAATCTTT TGTTAACCGG AATGATTTTA CCCGCCGGCA ATACCCTAGA TGAGGTGTTA AATAGCCAAC ATTTTGATAT AAAGATGTAT AACCCACATC ATGTCAAAAG TGTGGATATC TTGGGGGAGC CGTATTATCT GGCGGCCAAC TTTTCAGCAA GCTACGGTAT CTGGCTATCA GAGAACCGTC TAAATAACGT TGGCTACTTT AGCCTGTTAT CTAAACAGCA AACCCTAACG TTACCGCAGC TGTTCATGTT AGAGCCTTAT GACCCCAATA AGCGGGTAAT TATCATGTTA CATGGTCTGG CCTCAAGCCC TGAAACTTGG GTCAGTATCA CCAACGATAT CTCAAATGAC ACCAAGCTAC GCGACAATTA TCAGGTATGG CAGATATTTT ATCCCACCAA TATCCCTATC TTGGAGAATC GCTATCGTAT TCAACAGCTG ATTGAGACTA CCTATCATAT GAATGACCCA GAAGGGGTTC ATCCTGCTAG CCATAATAGT GTGCTTATAG GTCACAGCAT GGGCGGGGTT ATTGGCCGCA TGTTGGTCTC TAATGAAAAT CTGGAAGAAA AATTTAATAC GCTAAATACC CAGCAAAACA ATCTGCGTTT AAACAAACTA TTAGAGGATC AATTCGATAA ATCAAAGGTT AAAAACAGAC TACATTTACA CCAATTACAA AGCGTGGATA CGGCGGTATT TATTTCTGCA CCCTTTAGAG GGACTGACTT CGCTGATCGC TGGTTTACTC AGCTACTGCG CCGTGTGGTT CAGTTGCCTA TTGGTTTTGC TCAAACCATT CGTGGCAACC TTGCCAGCAT TGCTACTGAA GGGGAATTGG CGGCCAATCC TTTAGGCGCC TTATACTTTG AAAATGGGGC CAGTCAGTTA AGTGATAAGT CCTCATTTAT GCAGCTCACC GCTGACTTAC CGATTGCCGA CAATATCACT TATCATTCGA TTATTGCCAA TAGAGACTCA GACTTGTATA ACGGCTTATT AAAGCTCAAT ATCGCCTCAA CGCCAACCAC ATCCTTATCA AATAACGATG AGGCTCAAGC GCTTAAGGCC GGTGTGAACC TCAACGAAAT GGAGGCCAAC AAAGCGTCCT TAGATCCTGA CAAGGCCAAA GCACTAGAGG ATATAAAGAG CAATATCTCG CAGACGCTAT CCACGGCTTC CTCTGATGGC ATCGTGCCTT ATAGCAGCTC GCATTTAGAA GGGGCCGCCA GCGAGACCAT TATTAGCGGA GGTCATAGTA TCCAAGAGAC CCCAGAGGCG GTGCTCACCT TACGTAAGAT ATTGCATCAG CATTTACGCC AGCATCCACC GCAGCAGCGA CAGCAAAATT AG
|
Protein sequence | MAFFMQKKFI VARLTLNLAL TAGLLTAVGC STVSVDKKNS SQTIVKKRSN VVTTNALSSK SASVLVSIGV PARECLPKFD ECLQKIDAGL FNKDSKEALA LYAELSLAKA KEISALEDCV EKILRPPIDT YYANAPNTPE QEQQRISYLR QCNTDYRNNL LSAIKYSYAY LFYNQLNPEA ANAANMAVKP NNLPSNLDIQ TQDVYEAASD ALIKQLYSNK DHSQQIAKMT SFISSDLIDD AKLSMNTGAQ YANGIKYGDQ IKVLNFTFPP IEQDLNTDTD NQDLKHTQQT DSTKQLSKDL NLVETSIDLY LPNEPEYLQN TTRYNKSIDK LYASHDLSFS GLNTISEREG FGISYVTLFD DRLNTSVTNL IKSDNKTLNS EDPLDRIHLT GNLLLTGMIL PAGNTLDEVL NSQHFDIKMY NPHHVKSVDI LGEPYYLAAN FSASYGIWLS ENRLNNVGYF SLLSKQQTLT LPQLFMLEPY DPNKRVIIML HGLASSPETW VSITNDISND TKLRDNYQVW QIFYPTNIPI LENRYRIQQL IETTYHMNDP EGVHPASHNS VLIGHSMGGV IGRMLVSNEN LEEKFNTLNT QQNNLRLNKL LEDQFDKSKV KNRLHLHQLQ SVDTAVFISA PFRGTDFADR WFTQLLRRVV QLPIGFAQTI RGNLASIATE GELAANPLGA LYFENGASQL SDKSSFMQLT ADLPIADNIT YHSIIANRDS DLYNGLLKLN IASTPTTSLS NNDEAQALKA GVNLNEMEAN KASLDPDKAK ALEDIKSNIS QTLSTASSDG IVPYSSSHLE GAASETIISG GHSIQETPEA VLTLRKILHQ HLRQHPPQQR QQN
|
| |