Gene PsycPRwf_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0924 
Symbol 
ID5205089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1104174 
End bp1106705 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content43% 
IMG OID640599143 
Producthypothetical protein 
Protein accessionYP_001279824 
Protein GI148652731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTT TTATGCAAAA AAAATTTATT GTGGCACGAT TAACTCTAAA CTTAGCCTTA 
ACCGCCGGTC TATTGACAGC AGTAGGATGT AGCACCGTAT CTGTTGACAA AAAAAACTCC
AGTCAGACCA TTGTAAAAAA GCGCAGTAAT GTGGTCACCA CAAACGCTTT AAGCAGTAAG
AGCGCTTCGG TCTTGGTCTC TATAGGTGTG CCGGCTAGAG AATGCTTACC AAAGTTTGAT
GAGTGTCTAC AAAAGATTGA TGCCGGCTTA TTCAACAAAG ACTCTAAAGA AGCCCTAGCG
CTATATGCTG AGCTATCCCT GGCCAAAGCC AAAGAGATTT CGGCATTAGA GGACTGTGTT
GAGAAGATTT TACGACCACC TATTGATACT TATTATGCCA ATGCACCAAA TACCCCTGAG
CAAGAACAAC AAAGAATAAG CTACTTAAGA CAGTGCAATA CTGACTATCG CAATAACTTA
TTAAGCGCGA TAAAGTACAG CTATGCCTAT TTATTCTATA ATCAGCTAAA TCCTGAAGCC
GCTAATGCTG CTAACATGGC GGTAAAACCC AATAACCTAC CCTCCAATTT AGACATTCAA
ACTCAAGATG TCTATGAGGC GGCCTCAGAT GCCCTTATAA AACAGCTGTA TTCCAACAAA
GACCACAGCC AGCAAATCGC TAAAATGACG TCTTTTATTA GCTCTGATTT AATTGATGAT
GCTAAATTGT CTATGAATAC GGGTGCTCAA TATGCCAATG GCATTAAATA TGGCGATCAA
ATTAAAGTCT TAAACTTCAC CTTCCCGCCC ATTGAGCAAG ACCTTAATAC CGATACTGAC
AATCAGGATT TGAAGCACAC ACAACAGACA GATTCAACCA AGCAGCTCAG TAAAGACTTA
AATTTAGTAG AGACCTCTAT CGACTTATAT CTGCCTAATG AGCCTGAGTA TTTACAAAAC
ACCACCCGCT ATAACAAAAG CATAGATAAA TTGTATGCCA GCCATGACCT AAGCTTTTCG
GGGCTAAACA CCATCAGTGA GCGTGAAGGC TTTGGGATTA GCTATGTCAC TTTATTTGAT
GATCGCTTAA ATACGTCAGT GACCAATCTG ATTAAGTCTG ATAACAAAAC CTTAAACTCT
GAGGATCCAT TAGACCGCAT CCATTTAACC GGTAATCTTT TGTTAACCGG AATGATTTTA
CCCGCCGGCA ATACCCTAGA TGAGGTGTTA AATAGCCAAC ATTTTGATAT AAAGATGTAT
AACCCACATC ATGTCAAAAG TGTGGATATC TTGGGGGAGC CGTATTATCT GGCGGCCAAC
TTTTCAGCAA GCTACGGTAT CTGGCTATCA GAGAACCGTC TAAATAACGT TGGCTACTTT
AGCCTGTTAT CTAAACAGCA AACCCTAACG TTACCGCAGC TGTTCATGTT AGAGCCTTAT
GACCCCAATA AGCGGGTAAT TATCATGTTA CATGGTCTGG CCTCAAGCCC TGAAACTTGG
GTCAGTATCA CCAACGATAT CTCAAATGAC ACCAAGCTAC GCGACAATTA TCAGGTATGG
CAGATATTTT ATCCCACCAA TATCCCTATC TTGGAGAATC GCTATCGTAT TCAACAGCTG
ATTGAGACTA CCTATCATAT GAATGACCCA GAAGGGGTTC ATCCTGCTAG CCATAATAGT
GTGCTTATAG GTCACAGCAT GGGCGGGGTT ATTGGCCGCA TGTTGGTCTC TAATGAAAAT
CTGGAAGAAA AATTTAATAC GCTAAATACC CAGCAAAACA ATCTGCGTTT AAACAAACTA
TTAGAGGATC AATTCGATAA ATCAAAGGTT AAAAACAGAC TACATTTACA CCAATTACAA
AGCGTGGATA CGGCGGTATT TATTTCTGCA CCCTTTAGAG GGACTGACTT CGCTGATCGC
TGGTTTACTC AGCTACTGCG CCGTGTGGTT CAGTTGCCTA TTGGTTTTGC TCAAACCATT
CGTGGCAACC TTGCCAGCAT TGCTACTGAA GGGGAATTGG CGGCCAATCC TTTAGGCGCC
TTATACTTTG AAAATGGGGC CAGTCAGTTA AGTGATAAGT CCTCATTTAT GCAGCTCACC
GCTGACTTAC CGATTGCCGA CAATATCACT TATCATTCGA TTATTGCCAA TAGAGACTCA
GACTTGTATA ACGGCTTATT AAAGCTCAAT ATCGCCTCAA CGCCAACCAC ATCCTTATCA
AATAACGATG AGGCTCAAGC GCTTAAGGCC GGTGTGAACC TCAACGAAAT GGAGGCCAAC
AAAGCGTCCT TAGATCCTGA CAAGGCCAAA GCACTAGAGG ATATAAAGAG CAATATCTCG
CAGACGCTAT CCACGGCTTC CTCTGATGGC ATCGTGCCTT ATAGCAGCTC GCATTTAGAA
GGGGCCGCCA GCGAGACCAT TATTAGCGGA GGTCATAGTA TCCAAGAGAC CCCAGAGGCG
GTGCTCACCT TACGTAAGAT ATTGCATCAG CATTTACGCC AGCATCCACC GCAGCAGCGA
CAGCAAAATT AG
 
Protein sequence
MAFFMQKKFI VARLTLNLAL TAGLLTAVGC STVSVDKKNS SQTIVKKRSN VVTTNALSSK 
SASVLVSIGV PARECLPKFD ECLQKIDAGL FNKDSKEALA LYAELSLAKA KEISALEDCV
EKILRPPIDT YYANAPNTPE QEQQRISYLR QCNTDYRNNL LSAIKYSYAY LFYNQLNPEA
ANAANMAVKP NNLPSNLDIQ TQDVYEAASD ALIKQLYSNK DHSQQIAKMT SFISSDLIDD
AKLSMNTGAQ YANGIKYGDQ IKVLNFTFPP IEQDLNTDTD NQDLKHTQQT DSTKQLSKDL
NLVETSIDLY LPNEPEYLQN TTRYNKSIDK LYASHDLSFS GLNTISEREG FGISYVTLFD
DRLNTSVTNL IKSDNKTLNS EDPLDRIHLT GNLLLTGMIL PAGNTLDEVL NSQHFDIKMY
NPHHVKSVDI LGEPYYLAAN FSASYGIWLS ENRLNNVGYF SLLSKQQTLT LPQLFMLEPY
DPNKRVIIML HGLASSPETW VSITNDISND TKLRDNYQVW QIFYPTNIPI LENRYRIQQL
IETTYHMNDP EGVHPASHNS VLIGHSMGGV IGRMLVSNEN LEEKFNTLNT QQNNLRLNKL
LEDQFDKSKV KNRLHLHQLQ SVDTAVFISA PFRGTDFADR WFTQLLRRVV QLPIGFAQTI
RGNLASIATE GELAANPLGA LYFENGASQL SDKSSFMQLT ADLPIADNIT YHSIIANRDS
DLYNGLLKLN IASTPTTSLS NNDEAQALKA GVNLNEMEAN KASLDPDKAK ALEDIKSNIS
QTLSTASSDG IVPYSSSHLE GAASETIISG GHSIQETPEA VLTLRKILHQ HLRQHPPQQR
QQN