Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0912 |
Symbol | |
ID | 5204855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1087452 |
End bp | 1089245 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599131 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001279812 |
Protein GI | 148652719 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATATA AAGCCCCTCT TCGTGACATG CAGTTTGTTT TACATGAGCT TTTAGACAGC ACTGCACATT ACCAAAGCTT AGCGCCATAC CAAGAGGTAG AGCGTGACAT TATTGACAGT TATATTGAAG CGGCTGCCAG CTTTGCTGAA AACGAAATTG CCCCTTTAAA CCGCAGCGGT GACGAAGAAG GTTGTCAATT CAACAATGGC GAGGTCACTA CCCCTAAAGG CTTTAAAGAA GCTTATAAAC AATACTGTGA GCTAGGCTTT GCAGCGCTGG CTGCTGAAGA AGAATTTGGC GGTCAAGGCA TGCCGTTCTC CTTAGGTACT GTGGTTAACG AAATCATGGG CTCAGCCAAC TGGTCATTCT CAATGTATCC TGGCCTATCT CATGGCGCGA TTGCCACACT TGAGCACCAC GGTACGGATG AGCAAAAAGC CATTTACTTA GAAAAAATGG TCACCGGCGA ATGGTCAGGC ACCATGTGTC TCACCGAAGC GCATGCCGGC TCTGACTTAG GTATTATCCG TACAAAAGCA GAACCTAAAG GCGATGGTAC TTATGCCATT ACCGGTCAAA AAATCTTCAT CTCAGCCGGT GAGCATGATA TGACTGATAA CATCATTCAT ATTGTATTGG CCCGTTTACC AGGCGCCCCT GAAGGCACCA AAGGCATCTC ACTATTTATC GTACCAAAAG TGAACGTTAA CGCTGACGGT AGCTTAGCGG AGCGCAACCA AGTCACTTGT GGCTCAATTG AACACAAAAT GGGTATCAAA GCTTCTGCCA CCTGTGTAAT GAACTTCGAT GGTGCAACCG GTTACTTAAT TGGCCCAGAA AACCGTGGCC TAAACTGTAT GTTTACCTTT ATGAACGTGG CGCGTATCGG TACCGCCGTT CAAGGTCTGA CTGCATCAGA AGTGGCGTTC CAAGGCTCGC TAGAATATGC CAAAGAGCGT CTGGCCATGC GTTCACTATC TGGTGCTAAA GCGCCAGAGA AAGTAGCCGA TCCTATTATC GTGCATCCGG CTGTTCGCAA CATGCTATTG ACCGAAAAAG CCTTCGCTGA AGGTGGACGC GCCTTAGTTT ATTATTTGGC CATGTTTGCT GATACTGTGG CCAAAGGCAC AGGCGAAGAG CAGCAGTACG CGGATCAAAT GCTGTCTTTA TTGACGCCAA TTGCCAAAGC ATTCTTAACA GAAACTGGCT ATGAAGCTGC CAACCATGGC GTTCAAGTAT ATGGTGGTCA TGGCTTTATC CGTGAATGGG GTATGGAGCA AAACGTACGT GATACCCGTA TCGCATGCTT ATATGAAGGC ACCACTGAAA TCCAATCTTT AGACCTATTG GGCCGTAAAG TCTTGGGCTC ACAAGGTAAG ATGCTGGCCA ACTTTACCAA AGTTATCCAT AAATTCTGTC AAGAACATCA AGACAATGAA GCGATGGCTG AATTCATTGC CCCTCTTGAA AAGCTAAATA CTGAGTGGGC TGAATTAACG GCTCGTATCG GTGAGCAAGC GACCAAAAAC CCAGATTCAG TAGGTGCCGC TGCCGTAGAC TACATGTACT TCAGTGGCTA TGTGACCCTA GCTTACTTAT GGGCACGTAT GGTTGCTGTG TCTCAAAAAG CATTGGCTGA TGGCACCACA GAAACCGGTT TTTATGATGC GAAAATCAAA ACCGCTCACT TCTACTACAG CAAGTTGTTA CCACGCACTC GCACTTACGT AGCCCGTATC GAGTCAGGCG CTGAGCCTTA CATGAGCATG GATGTGGATC AGTTTGTTTT TTAA
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Protein sequence | MQYKAPLRDM QFVLHELLDS TAHYQSLAPY QEVERDIIDS YIEAAASFAE NEIAPLNRSG DEEGCQFNNG EVTTPKGFKE AYKQYCELGF AALAAEEEFG GQGMPFSLGT VVNEIMGSAN WSFSMYPGLS HGAIATLEHH GTDEQKAIYL EKMVTGEWSG TMCLTEAHAG SDLGIIRTKA EPKGDGTYAI TGQKIFISAG EHDMTDNIIH IVLARLPGAP EGTKGISLFI VPKVNVNADG SLAERNQVTC GSIEHKMGIK ASATCVMNFD GATGYLIGPE NRGLNCMFTF MNVARIGTAV QGLTASEVAF QGSLEYAKER LAMRSLSGAK APEKVADPII VHPAVRNMLL TEKAFAEGGR ALVYYLAMFA DTVAKGTGEE QQYADQMLSL LTPIAKAFLT ETGYEAANHG VQVYGGHGFI REWGMEQNVR DTRIACLYEG TTEIQSLDLL GRKVLGSQGK MLANFTKVIH KFCQEHQDNE AMAEFIAPLE KLNTEWAELT ARIGEQATKN PDSVGAAAVD YMYFSGYVTL AYLWARMVAV SQKALADGTT ETGFYDAKIK TAHFYYSKLL PRTRTYVARI ESGAEPYMSM DVDQFVF
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