| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0901 |
|---|
| Symbol | |
|---|
| ID | 5204585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1070212 |
|---|
| End bp | 1072815 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640599120 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_001279801 |
|---|
| Protein GI | 148652708 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.581855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGACG CCTATCGTAA ACATGTCGAA GAACGTGCCC AACTTGGTAC AGTACCCCTA
CCACTATCTG AGCATCAGAC TGCCGATTTA GTTGAGCTAT TAAAAAACCC ACCAGCCGGT
GAAGAAGAGT TTTTGATGGA CCTTTTGGTT AACCGTGTAC CTGCCGGTGT TGACCAAGCA
GCTTATGTAA AAGCGGCCTT TTTAGCAGCG ATCGTAAAAG GCGAAGCAAC CTCACCATTA
ATCACTAAGC AAAAAGCAGT AGATATCCTA GGCACTATGC AAGGCGGTTA TAACGTATTG
CCTTTAGTTG AAGCGCTAGA TGATGCTGAA GTGGCTGAGA ACGCAGCAGA AGCTCTAAAG
AAAACCCTAT TGGTATTCGA TGCTTTCAAT GATGTGACCG AAAAAGCAGA AGCGGGTAAC
GCTAAAGCCA AAGAAGTGGT TCAGTCATGG GCTGACGCTG AATGGTTCTT AAACCGTCCT
GAAGTACCAC AAAAATCGAC TTATACGGCG TTCAAAGTAA CGGGCGAAAC TAACACAGAT
GATTTGTCTC CAGCACAGGA TGCGTGGAGC CGTCCGGATA TTCCACTTCA CTCATTGGCT
ATGCACAAAA ACTCTCGTGA CGGCATCACT GCTGATGAAG AGGGCGTACG TGGTCCAATG
AAGCAGATTG AAGCGCTAAA AGAAAAAGGC TTCCCTCTAG CGTATGTGGG TGACGTTGTG
GGTACCGGTT CTAGCCGTAA ATCTGCTACC AACTCAGTAC TTTGGTTAAT GGGCGATGAT
ATTCCTAACG TGCCAAACAA ACGTGCTGGC GGTCTGGTAT TGGGCGGCAA AATTGCGCCT
ATCTTCTATA ACACGATGGA AGACTCAGGT GCACTACCGA TTGAAAATGT AGCTGTTGAT
AACATCAATA TGGGCGATGT ATTTGATGTT TATCCTTATG AGGGTAAAAT CACTAAGCAT
GACTCAGATG AAGTATTATC AACCTTCAAA CTAAACTCAA ATACCTTACT AGATGAAGTT
CGTGCCGGTG GTCGTATTCC ATTAATCGTG GGCCGCGCCT TAACCAACCG CGCTCGTGAA
TACATGGGTC TTGAGCATTC AGACGTATTT GCAAAACCTG AGCAGCCTGC GTCATCTGAT
AAAGGCTTTA CTTTAGCTCA GAAGATGGTT GGTAAAGCAT GTGGTATGGA AGGTGTACGT
CCAGGTATGT ACTGTGAGCC TAAGATGACT ACGGTTGGTT CGCAAGATAC CACTGGTCCT
ATGACTCGTG ATGAGTTAAA AGACTTAGCT TGCTTAGGTT TCCAAGCAGA TCTAGTGATG
CAGTCTTTCT GTCACACAGC CGCTTATCCT AAGCCAGTTG ACGTTGAAAC TCAGCACACA
CTACCAGATT TCATCATGAA CCGCGGCGGT GTCAGCTTAC GTCCAGGTGA CGGTATCATC
CACTCATGGC TAAACCGTAT GCTTCTTCCA GATACTGTTG GTACCGGTGG TGACTCGCAT
ACTCGTTTCC CAATGGGTAT CTCATTCCCA GCAGGTTCTG GCTTGGTAGC TTTCGCAGCA
GCGACGGGTG TTATGCCACT AGATATGCCT GAGTCTGTTC GTGTTCGCTT CGTTGGTGAG
CGTCAGCCTG GCATCACCCT ACGTGACCTA GTACACGCGA TCCCATTACA AGCGATCAAA
GAAGGTTATT TAACCGTTGA TAAGAAAGGC AAAATCAACG AGTTTAACGG CCGTATCTTA
GAGATTGAAG GTCTAGAAGA CTTAACGGTA GAGCAAGCGT TCGAACTATC AGACGCCTCA
GCTGAGCGTA GTGCAGCGGG TTGTACCATC ACTTTATCTG AAGAGTCAGT TACTGAGTAC
CTAAACTCAA ACATCACGCT TCTTAAGTGG ATGATTGCTG AAGGCTACGG CGATGCTCGT
ACGCTAAGCC GTCGTATCGA AGCGATGCAA GAGTGGTTGA AGAACCCAAG CTTGATGCGT
GCTGACGCTG ATGCTGAATA CGCCATCGAT ATGACCATCG ATATGAGCCA AATCAAAGAG
CCTGTACTGT GCTGCCCGAA CGATCCAGAT GATGCCAAGA CTTTATCTGA CGTCGCTGGC
GACAAGATTG ATGAAGTATT CATCGGTTCT TGTATGACCA ACATCGGTCA CTTCCGTGCC
GCAGGTAAAC TGCTACAAGA AGTACCAGCA GGTAGCCTGA AAACTCGTCT ATGGATTGCA
CCACCCACTA AGATGGATGC ACGCCAGCTA ATGGAAGAGG GCTACTACAA TACTTACGCA
CAAGCCGGCG CACGTACTGA GATGCCAGGT TGTTCGCTAT GTATGGGTAA CCAAGCACGT
ATTGCACCAA ACTCTACAGC GGTATCTACC TCTACCCGTA ACTTCCCGAA CCGTTTGGGC
CAAGGCGCTA ACGTATACCT AGCTTCAGCT GAGCTTGCGG CAGTTGCTGC GGTACTTGGT
AAGCTGCCAA CGAACGAAGA GTATCAGCAG TACGCTGGCA TGCTAAACAG CATGGGCGGT
GAAGTATATC GTTACATGAA CTTCGATCGT ATGGAAGAGT ACACCGAAGA GGCGGATAAA
ATTAACGTGG CGCAATTGTC ATAA
|
|---|
| Protein sequence | MLDAYRKHVE ERAQLGTVPL PLSEHQTADL VELLKNPPAG EEEFLMDLLV NRVPAGVDQA
AYVKAAFLAA IVKGEATSPL ITKQKAVDIL GTMQGGYNVL PLVEALDDAE VAENAAEALK
KTLLVFDAFN DVTEKAEAGN AKAKEVVQSW ADAEWFLNRP EVPQKSTYTA FKVTGETNTD
DLSPAQDAWS RPDIPLHSLA MHKNSRDGIT ADEEGVRGPM KQIEALKEKG FPLAYVGDVV
GTGSSRKSAT NSVLWLMGDD IPNVPNKRAG GLVLGGKIAP IFYNTMEDSG ALPIENVAVD
NINMGDVFDV YPYEGKITKH DSDEVLSTFK LNSNTLLDEV RAGGRIPLIV GRALTNRARE
YMGLEHSDVF AKPEQPASSD KGFTLAQKMV GKACGMEGVR PGMYCEPKMT TVGSQDTTGP
MTRDELKDLA CLGFQADLVM QSFCHTAAYP KPVDVETQHT LPDFIMNRGG VSLRPGDGII
HSWLNRMLLP DTVGTGGDSH TRFPMGISFP AGSGLVAFAA ATGVMPLDMP ESVRVRFVGE
RQPGITLRDL VHAIPLQAIK EGYLTVDKKG KINEFNGRIL EIEGLEDLTV EQAFELSDAS
AERSAAGCTI TLSEESVTEY LNSNITLLKW MIAEGYGDAR TLSRRIEAMQ EWLKNPSLMR
ADADAEYAID MTIDMSQIKE PVLCCPNDPD DAKTLSDVAG DKIDEVFIGS CMTNIGHFRA
AGKLLQEVPA GSLKTRLWIA PPTKMDARQL MEEGYYNTYA QAGARTEMPG CSLCMGNQAR
IAPNSTAVST STRNFPNRLG QGANVYLASA ELAAVAAVLG KLPTNEEYQQ YAGMLNSMGG
EVYRYMNFDR MEEYTEEADK INVAQLS
|
|---|
| |