| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0847 |
|---|
| Symbol | |
|---|
| ID | 5206261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1001982 |
|---|
| End bp | 1002572 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640599068 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001279749 |
|---|
| Protein GI | 148652656 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0972669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTT ACGCCACCGC ACTAACTTTG TTTTTGATTA TGGATCCATT GGGGAATATT
CCCATTTTCT TATCAGTACT TGATAAGGTG CCAGAGCAAA GGCGCAGATT TATTATTATC
AGAGAGCTAC TGATAGCCTT AGTGCTTATG ATCCTGTTTT TATTTGCAGG TGGCAGTATT
CTACATACCT TGGGGCTTAG TACTGAAGCG GTTGCTATTG GTGGCGGTTT GGTGATGATG
ATTATCGCCA TTCGTATGAT TTTTCCGAAC CGTGGTTCAG TCATGGGCGA TGAAGATGAC
GTAGACGGTG AGCCATTTAT TGTGCCTTTG GCCATTCCCT TAATTGCTGG GCCTTCTATT
TTGGCCACGC TGATTTTATT GACTGAAAAA AACCCAGAGA GTATCCCGAA GGCGTTAGTG
GCCCTACTTT TGGCATGGTT TGTCTCGGCA GTTATCTTGT TCTTTTCAAC CAAGCTGTAC
AAAGTGCTGG GTAATCGTGG TCTAAAAGCC ATTGAGCGCT TGATGGGGAT GATTCTAATC
TCAATTTCGG TACAAATGCT GTTAAACGGT TTTTCTTCGT TTATGAGCTA A
|
|---|
| Protein sequence | MEIYATALTL FLIMDPLGNI PIFLSVLDKV PEQRRRFIII RELLIALVLM ILFLFAGGSI
LHTLGLSTEA VAIGGGLVMM IIAIRMIFPN RGSVMGDEDD VDGEPFIVPL AIPLIAGPSI
LATLILLTEK NPESIPKALV ALLLAWFVSA VILFFSTKLY KVLGNRGLKA IERLMGMILI
SISVQMLLNG FSSFMS
|
|---|
| |