Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0781 |
Symbol | |
ID | 5204933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 930133 |
End bp | 931053 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599002 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001279683 |
Protein GI | 148652590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0769217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC GCCATTTTTT AACTCTACTT GATTTGTCTC CCGCCGAGCT TGAAGCTTTA ATTAAGCGTG CAAGTGAGCT TCGAAAAATG CAGCATGCAG GCGAAGTATA TCAGCCCTTC GTGGGCCGTA CCTTGGGCAT GATTTTTGAA AAGTCCTCTA CTCGCACCCG CATTTCATTT GAAACGGGTA TGGGACAATT TGGTGGTCAT GCCATCTTTT TATCCCCCAA AGATACCCAG CTTGGCCGCG GTGAGCCGAT TGAAGACTCA GCACGGGTCA TCTCAAGCAT GGTCGATATT ATTATGATTC GTACCTTTGA GCATGAAAAG GTAGAAAAAT TTGCCCAATA TTCCTCTGTA CCTATTATCA ATGCACTAAC CGATGACTTC CACCCCTGCC AGCTATTGGC TGATATGCAG ACCTTTTATG AGCACCGCGG CAGTATTAAA GATAAGATTG TCACGTGGGT AGGCGATGGC AATAACATGT GCTCCTCGTT TATGGCTGCG GCAAATCAGT TTGGCTTTGA GCTTCGTGTG GCTGCACCTT ATGGCTTTGA GCCCAACCCT GAGCTGATGG AGAAGTTCAA GCACTGCGTA AGCTTGGTTG ATGATGTGCA AGATGCGGCC AAAGATGCGC ATTTAATTGT CACCGATGTC TGGGCCAGTA TGGGCCAAGA AAGCGAACAA AATACTCGGG CTCGCCGCTT TGCGCCTTAT CAAGTCACGC CTTCTATGTT AGACAAAGCT GACCCTGAGG TGCTATTTAT GCACTGCTTG CCAGCCCACC GCGGCGAGGA AATCTCACAT GATATGCTTG ATGACCCCCG CTCTGTGGTC TGGGACGAGG CCGAAAACCG CTTGCATGCC CAAAAAGCCT TAATGGAATT TTTGCTTAAA GATAAAATAA AGCTTAACTA G
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Protein sequence | MSVRHFLTLL DLSPAELEAL IKRASELRKM QHAGEVYQPF VGRTLGMIFE KSSTRTRISF ETGMGQFGGH AIFLSPKDTQ LGRGEPIEDS ARVISSMVDI IMIRTFEHEK VEKFAQYSSV PIINALTDDF HPCQLLADMQ TFYEHRGSIK DKIVTWVGDG NNMCSSFMAA ANQFGFELRV AAPYGFEPNP ELMEKFKHCV SLVDDVQDAA KDAHLIVTDV WASMGQESEQ NTRARRFAPY QVTPSMLDKA DPEVLFMHCL PAHRGEEISH DMLDDPRSVV WDEAENRLHA QKALMEFLLK DKIKLN
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