Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0745 |
Symbol | |
ID | 5205180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 888345 |
End bp | 889568 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598964 |
Product | periplasmic binding protein |
Protein accession | YP_001279647 |
Protein GI | 148652554 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.300436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAAG CTATTCGTGC CACATTGGCA GCAGCAGTAT TAATGGCAAC GATGAACTCA CAAGCTGAAG TTAAGACCAT TCATGATGTG TTAGGGCGTG ATGTTAAAGT TGACGTGCCA GCCAAAAGAG TCGTGCTAGG GTTTTATTAT CCAGATTATA TTGCAGCAAC AGGTGCTGAA AATTTTGGAC ACGTGGTGGG TATTTCTCGA GAGTTCTGGG AGAGCTTTAA CCCAGGAAGC TGGGCGCTAT ACAGTCAACA ACTGCCCAAT CTAAAAAACA TTGGTGATAT TGGCAATATT GATAGAGGCA CATTCTCACT CGAAAAAACT CTGGCCATGA AGCCGGATGT GGTGGTATTA GCAAAGTGGC AATACGATAC GCTAAAGGCT GAAATACCAC GTTTTGAGGC CGCAAACATT CCTGTGGTAG TGGTGGACTA TAATGATCAA AGCGTCGCTA ATCACACCAA CAGTACCAAG ATTTTTGGAC AAATTGCAGG GACAGAGCAG CGCGCCAATC AAGCGGCACA AGAGTATGCC GATGGCATTG CTGATATCCA AAAACGGGTC AAAGCGGTAG GGACTGCCAA GCCAAAAATC TATATTGAAT TTGGCGATAA AGGCCCACAA GAGCATAGCT TTACCTTTGG CAAAAATATG TGGGGCGCTA TTGCCGATAC GGTAGGCGGT GAAAACATCA GTAAGCCTTT TGTTGAGAAT TGGGGACCCA TTAACCCCGA GCAGCTCTTA GTGAGTAAGC CGGACGTGAT TATTATCTCA GGTACCGAAG TGGGTATGAA GCAGACTGAT GCTATGGCAA TGGGTATTGA TATTAGTGCT GATGAGGCTC AGCGCCGGTT AAAAGGGTTT ACCACCCGAA ATGGTTGGGA GAATCTGCCT GCGGTGAAGA ACAACCGTGT GTATGGTATC TATCATACCG CTTCTCGCTC GTTGTCTGAC TTGGCATCGG CTCAGTTTAT GGCAAAAACC TTGTACCCTG AAGCCTTTAA AGATGTTGAT CCTGAAAAAA CCTATACAGA GTTCCATGAA AAATACCTGC CCGTTAAACC CAGCGGTACG TTTTTTATTC AGCTAGGCTG CGGTGCAAGC CTTTGTAAAG ACAAGGCATC TGCTGTAGAA CAAGCGGCGC CAACAGAGGC AGCGCCTCAG ACCCTGTCAT GGTGGGATAA GCTGGTCAAT TGGCTACGTC ACTTGTTTAC CTGA
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Protein sequence | MRQAIRATLA AAVLMATMNS QAEVKTIHDV LGRDVKVDVP AKRVVLGFYY PDYIAATGAE NFGHVVGISR EFWESFNPGS WALYSQQLPN LKNIGDIGNI DRGTFSLEKT LAMKPDVVVL AKWQYDTLKA EIPRFEAANI PVVVVDYNDQ SVANHTNSTK IFGQIAGTEQ RANQAAQEYA DGIADIQKRV KAVGTAKPKI YIEFGDKGPQ EHSFTFGKNM WGAIADTVGG ENISKPFVEN WGPINPEQLL VSKPDVIIIS GTEVGMKQTD AMAMGIDISA DEAQRRLKGF TTRNGWENLP AVKNNRVYGI YHTASRSLSD LASAQFMAKT LYPEAFKDVD PEKTYTEFHE KYLPVKPSGT FFIQLGCGAS LCKDKASAVE QAAPTEAAPQ TLSWWDKLVN WLRHLFT
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