| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0646 |
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| Symbol | |
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| ID | 5206674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 782045 |
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| End bp | 782827 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640598867 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001279551 |
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| Protein GI | 148652458 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTT CCAAACTATT CGATTTAACC AATAAGACAG CTATTGTGAC CGGTGGCGCC
AATGGTATCG GCAAAGCATC TGCTATCCTA CTTGCCCAGC ACGGTGCTAA TGTCGTTATT
GCCGACCTAA AATTAGACGA TGCACAAAAA GTCGCTAAAG AGATAACTGC TCTAGAGGAC
ACAGATGCTC AAGCATTGGC CATTGAGTGC AATATTTTAA AAGATGATAA CTTAACCAAT
CTTGTTGATA AAACCATTGA GACATTCGGT GCGGTTCATA TCCTGATTAA TAATGCTGGC
GGCGGGGGCG GTGGAAAAGA AAACCCCTTT GAGATAGACG TTAGTGATTT TAAACGTGAT
TTTGAGCTGA ACGTATTTAG CGGTTGGCGT CTATGTCAGC TGGTTGTGCC ACATATGAAA
AAAGCAGGTT ATGGCTCTAT TATCTTCACG ACCTCTATGG CCAGCATCAA TAAAAGCCCT
AACATGAGCG GTTATGCCAG CTCAAAAGCT GCGGTTAATC ATATGGTCGC AAACCTTGCT
CACGACTTTG GCCCAGAAGT ACGCATTAAT GCCGTAGGAC CAGGCGCCAC CAAAACAGAC
GCTCTGCAAA CGGTGTTAAC GCCTGAGCTT GAAGATAAGA TGTTAGAGCA TACTCCAATT
AAGCGCTTAG GCGAACCTGA AGATATTGCA GGGGCTATGC TGTACTTTGC CTCTCCCATA
TCTGAGTGGG TGAGTGGACA GACCTTATTT GTAAATGGTG GTGGCACGCA GACGTTAGAT
TGA
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| Protein sequence | MTPSKLFDLT NKTAIVTGGA NGIGKASAIL LAQHGANVVI ADLKLDDAQK VAKEITALED
TDAQALAIEC NILKDDNLTN LVDKTIETFG AVHILINNAG GGGGGKENPF EIDVSDFKRD
FELNVFSGWR LCQLVVPHMK KAGYGSIIFT TSMASINKSP NMSGYASSKA AVNHMVANLA
HDFGPEVRIN AVGPGATKTD ALQTVLTPEL EDKMLEHTPI KRLGEPEDIA GAMLYFASPI
SEWVSGQTLF VNGGGTQTLD
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