Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0626 |
Symbol | |
ID | 5206278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 755209 |
End bp | 756315 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640598842 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001279531 |
Protein GI | 148652438 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.511455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC TCAAGTTACG CATAAAAGAT AAGCACATAG ACCAACTTAA CCGCCTAAGC GGTTCGGTTA ACTTTGCGTG GAATTATATT AATGCGTTAA GTTTTGAGCA TTTAAGGCGC ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT TTAGGCTTAC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAA CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC TTAGGTTGGA TACCTTTTAA AAAGTCTGCT ATCAAGTATC TAAATACAAG ACAAACAGGT AAAAAAGCAC TGAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA GACAGCCGTA ATCGCTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT GGTAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGGAAT CTGCTACCAC ATCAAACGGT GATAAGCTAA TTATTAAGCA GACCCAAAAA TGGGCTAAAA AGCTTGCCAT CGCTCAACGT GCAAACAATA AAAGCCGAGT AAAGGCAATC CATGCCAAAA TCAAAAATTC AAGATTAGAC TTAATTCACA AGTTCACCAC CAAGCTAGTT CAAAATAATG CTTTAATTGT GGTTGGTGAT ATTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGT GCTGTCTTAA AATAAGTGAT AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT CTAGCTGTAG CAATCCCCTC GGTTTAG
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Protein sequence | MKTLKLRIKD KHIDQLNRLS GSVNFAWNYI NALSFEHLRR TGKYFSAYDL SQYTKGSGEY LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS GKGSVGIDLG LKESATTSNG DKLIIKQTQK WAKKLAIAQR ANNKSRVKAI HAKIKNSRLD LIHKFTTKLV QNNALIVVGD IKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL EIVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR LAVAIPSV
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