Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0543 |
Symbol | |
ID | 5206865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 646489 |
End bp | 647151 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598758 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_001279448 |
Protein GI | 148652355 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000642474 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000126844 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCCCAA CACCTATACA GTCAAATTCA CAATCTAGCA TTTTTAATTT GCCTAATAAC TTAACCATCG CCCGTATTGC GATGATTCCG TTGTTTGTGG CGATCGCCTA TTGGCCGCCA GCCTTAGGTA TTGGTGTGCC GATGATTTCG GACAATACCA TTGCCAATAT TGGTATGAAT ATGGATGCGT TTAGTGACAG CATGCTGCGC CATTTGCTGT TGACTTTATT GTTTGTGTTG GCAGCCATTA CCGACTGGTT AGATGGTTAT TTGGCCCGAA AAATGAATAT CGTATCCGCC TTTGGTCGCT TTTTAGACCC AGTGGCAGAT AAGCTGATGG TGGCTGCGGC GCTGATTGTA TTAGTGCAGT GGCATCCTAA TATTATTATG GCCATTGCCG CCATTGTTAT TATTTCACGT GAGATTGCGG TATCTGCGCT GCGTGAGTGG ATGGCAGAGC TTGGGGCCCG TACTAGCGTG GCGGTGTCCT ATGTGGGGAA GTTAAAAACT ACGTTCCAAA TGATAGCCAT TACTGTGCTG CTGCTTAATG TAGAGTCACT GGAGTTGTTA GGCTATGGCT TGATGGTGGC AGCGGTTGTA TTAACCTTAT GGTCTATGAT GATCTATATG CGCGCGGCTT GGCCTTATCT CAAACAAAAC TAG
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Protein sequence | MSPTPIQSNS QSSIFNLPNN LTIARIAMIP LFVAIAYWPP ALGIGVPMIS DNTIANIGMN MDAFSDSMLR HLLLTLLFVL AAITDWLDGY LARKMNIVSA FGRFLDPVAD KLMVAAALIV LVQWHPNIIM AIAAIVIISR EIAVSALREW MAELGARTSV AVSYVGKLKT TFQMIAITVL LLNVESLELL GYGLMVAAVV LTLWSMMIYM RAAWPYLKQN
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