Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0526 |
Symbol | ddl |
ID | 5205497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 628973 |
End bp | 629971 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598741 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001279431 |
Protein GI | 148652338 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000337974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000125004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCATGA CTATGACTCA ATCTGCTACC AACCCAACTG CAACCCCTGT ATCTGCTAAC AAAGCTTCTG CTAACGCCGC CACGACTCAA GATCCAAGCA TCTTTGGTAA GGTCGCCGTG GTCTTTGGGG GTAATAGCAA TGAGCGAGCA GTGTCATTAG ACAGTGGCAA TGCGGTATTA CAGGCGCTAC AGTCACAGGG CATCGATGCC ACTCACTTTG ACCCTAAAGA CCAAGATGTG ACTGAATTAA AAAATTACGA CCGTGTATTT AATGTGCTAC ATGGCCGCGG CGGTGAAGAT GGTCAGTTAC AAGGCCTGTT AGATTGGCTG GGTCTACCCC AGACAGGATC CGGTGTTTTG GCATCAGCGA TTGGTATGGA CAAAGTACGT ACTAAGCAAT TGTGGCACGG CTGTGGATTA TCTACTGCGC CTTTTGCAGT CTTGGGCGCT GACACAGACT GGCAGCAAAT CGTTAATACT TTGGGTCTGC CTTTAATTGT AAAGCCAGTG CATGAAGGCT CAAGTATTGG TATGAGCAAG GTGAATACGT TAGATGAGCT GCCAAAAGCC TATGAAGTGG CAGCAGGGTG TGGTGATGTG GTGATGGCAG AAAAATGGAT TACTGGCCGT GAGTTTACCA TCGTTATTAT CGATGATGAG GCTTATCCAG TTATTCGCCT GCAGCCTGCC GACATCTCTA ATTTCTACGA CTATGAGGCC AAATACAATC GTAACGATAC TCAGTACCAT ATTCCTTGTG GCTTAAGCGC AGAAGAAGAA GCACATTTAC AGGCACTAAG CTTGGCGGCA TTTAAGGCAG TAGACGCCAA AGGCTGGGGC CGTATTGATG CTATGCAAGA CGAAGAAGGT AACTTTTGGC TATTAGAGAT TAATACCGTA CCTGGTATGA CCAGTCACAG CTTAGTACCT ATGGCAGCTA AAGCACGTGG GATGAATTTT GAACAGCTAT GTTGGCATAT CTTAGCCCAG ACGCTGTAA
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Protein sequence | MPMTMTQSAT NPTATPVSAN KASANAATTQ DPSIFGKVAV VFGGNSNERA VSLDSGNAVL QALQSQGIDA THFDPKDQDV TELKNYDRVF NVLHGRGGED GQLQGLLDWL GLPQTGSGVL ASAIGMDKVR TKQLWHGCGL STAPFAVLGA DTDWQQIVNT LGLPLIVKPV HEGSSIGMSK VNTLDELPKA YEVAAGCGDV VMAEKWITGR EFTIVIIDDE AYPVIRLQPA DISNFYDYEA KYNRNDTQYH IPCGLSAEEE AHLQALSLAA FKAVDAKGWG RIDAMQDEEG NFWLLEINTV PGMTSHSLVP MAAKARGMNF EQLCWHILAQ TL
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