| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0525 |
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| Symbol | murC |
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| ID | 5205496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 627401 |
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| End bp | 628831 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598740 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001279430 |
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| Protein GI | 148652337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0132374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000636277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAAAAT CAGCCCTGCC AAAAAGATTA ATCGAAATTC CAGAAATGCG CCGCATTAAA
AGCATTCACT TTATCGGCGT GGGTGGTGCA GGGATGTGCG GGATTGCTGA GGTAATGAAA
AACCAAGGCT ATGGTGTTAG TGGCTCAGAC ATTAAAGAAA GTCCGGTAAC CAAGCGCTTA
CAAAGCTTGG GAATTGAAGT ATTTATCGGT CATGACTCAA AAAATATTGC CAATGCCGAC
GTGGTCGTGG TCTCTTCTGC CATTGATCGC GAGAATCCTG AGATTCAGGC TGCTCTAAAA
GCACAATTAC CCGTGGTACG CCGTGCTGAT ATGCTGGGTG AATTAATGCG TTATCGTCAT
GGCATCGCCG TGGCCGGTGC CCATGGTAAG ACGACAACCA CGAGCTTGCT GACCATGATG
ATGACAGAGG CCGGGTTTGA TCCTACCTAT GTTATCGGTG GTAAACTTAA TGCTTCAGGA
AAAAATGCTT CGCTGGGTGA AAGCCGCTAT TTAATTGCAG AAGCTGATGA GTCAGATGCT
TCATTTTTGA CCCTGCATCC TATGGCTGCT ATTGTGACCA ATATTGACCA AGATCATATG
GATACTTACG GTAATAGCTT TGATAAATTA AAAGCCGCTT ACATCCAGTT TTTACAAAAT
ATGCCGTTTT ATGGTCTGGC TGTGGTCTGC GGTGATGATA AAGAGCTGTT CGATATGATT
GATGATATTG GTCGCCCAGT ATTAACTTTC GGCTTAGAGC CGCACAACAA TGTGCAGGCC
ACCAATGTAC GTGTTGATGG CACTAAAACT CACTTCACCG TGCTGCGTAA AGACCGTGAG
CCATTGGAAT TAACGTTAAA CATTCCAGGG CAACACAACG TACTTAACGC CTTAGCTGCC
ATTACTATGG CCACCGATGA GGGGGTGAAT GATGATGCTA TTAAACGGGC GTTGGCAAAG
TTTGCTGGGG TAGGTCGCCG CTTTGAGCAG CAAGCTTGCG TGGCCAAAGA TGACGGTGAT
GTTTTATTAA TTGATGACTA TGGTCATCAT CCAGTAGAGG TGGCAGCGAC TATTAAAGCG
GCGCGCGCCA GTTATCCTGA GCGCCGTTTG GTGATGTTAT TCCAGCCGCA CCGTTACAGC
CGTACTCGTG ATTGTTATGA TGACTTTGTG GCGGTATTAT CACAAGTGGA TGTGCTGCTA
TTGCTGGATG TGTATAGTGC CGGTGAAGCG CCAATTGTGG GCGCTGATAC CAAGTCATTG
GCTCGTAGTA TCCGCTTGCG CGGTGAAGTT GAGCCGGTTG TGGTGGATAA AGATGAGCTG
GCCCCTGTGA TGCAGCGGGT GCTACAAGCG GGTGATATGC TCATTACACA AGGCGCAGGC
AACGTAGGTC AGCTAAGCCA ACAATTAGCG GCCAATAACC TGTATCTTTA A
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| Protein sequence | MSKSALPKRL IEIPEMRRIK SIHFIGVGGA GMCGIAEVMK NQGYGVSGSD IKESPVTKRL
QSLGIEVFIG HDSKNIANAD VVVVSSAIDR ENPEIQAALK AQLPVVRRAD MLGELMRYRH
GIAVAGAHGK TTTTSLLTMM MTEAGFDPTY VIGGKLNASG KNASLGESRY LIAEADESDA
SFLTLHPMAA IVTNIDQDHM DTYGNSFDKL KAAYIQFLQN MPFYGLAVVC GDDKELFDMI
DDIGRPVLTF GLEPHNNVQA TNVRVDGTKT HFTVLRKDRE PLELTLNIPG QHNVLNALAA
ITMATDEGVN DDAIKRALAK FAGVGRRFEQ QACVAKDDGD VLLIDDYGHH PVEVAATIKA
ARASYPERRL VMLFQPHRYS RTRDCYDDFV AVLSQVDVLL LLDVYSAGEA PIVGADTKSL
ARSIRLRGEV EPVVVDKDEL APVMQRVLQA GDMLITQGAG NVGQLSQQLA ANNLYL
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