Gene PsycPRwf_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0512 
Symbol 
ID5205501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp610754 
End bp611374 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content45% 
IMG OID640598727 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001279417 
Protein GI148652324 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CCTTTATTAA AGCCCGCGCT TCTCACAAGC CTATACCTCT AAGCATTGAA 
TCAGGTCTTT TAACTCAAGC CGACTGGCTG CCCTCACCTA ATTACAATCA GCGTCCTGAA
TCTTGCGAAA TTAGTGCCAT CGTTATCCAT AATATTAGCT TGCCACCTAA TGAGTTTGGT
CAAACAAATA AACAAGGTCT ACATTATGTC AAAGCATTAT TTACCAATAC TTTGGATTGG
GACGCACATC CTTATTTTAA GAGCATTGAA GGCATGGAGG TCTCAGCGCA TTTATTTATC
GAGCGTAGTG GCCAAATCAC CCAATTGGTC AACTTTGAAA ACAGAGCTTG GCATGCTGGG
CGATCAAGCT ATCTGGGCCG GCCTGAGTGC AACGATTACA GCATAGGTAT TGAGCTTGAA
GGCTCAGATT TTCAGGCTTT CACCGCTGAG CAGTACACCG CCTTGTCCAG TGTAATCGCC
GCTATTTATA AGGCTTATCC CAAAACACGC CGTCATTTAA CAGGCCACAG TGATATTGCC
CCTGGGCGTA AAACGGATCC AGGAGAGTAT TTTGAATGGG ACACGCTGCG TGACTTAGTC
AGCACCTTGG TGGCTAAGTA A
 
Protein sequence
MKKPFIKARA SHKPIPLSIE SGLLTQADWL PSPNYNQRPE SCEISAIVIH NISLPPNEFG 
QTNKQGLHYV KALFTNTLDW DAHPYFKSIE GMEVSAHLFI ERSGQITQLV NFENRAWHAG
RSSYLGRPEC NDYSIGIELE GSDFQAFTAE QYTALSSVIA AIYKAYPKTR RHLTGHSDIA
PGRKTDPGEY FEWDTLRDLV STLVAK