Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0512 |
Symbol | |
ID | 5205501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 610754 |
End bp | 611374 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640598727 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_001279417 |
Protein GI | 148652324 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC CCTTTATTAA AGCCCGCGCT TCTCACAAGC CTATACCTCT AAGCATTGAA TCAGGTCTTT TAACTCAAGC CGACTGGCTG CCCTCACCTA ATTACAATCA GCGTCCTGAA TCTTGCGAAA TTAGTGCCAT CGTTATCCAT AATATTAGCT TGCCACCTAA TGAGTTTGGT CAAACAAATA AACAAGGTCT ACATTATGTC AAAGCATTAT TTACCAATAC TTTGGATTGG GACGCACATC CTTATTTTAA GAGCATTGAA GGCATGGAGG TCTCAGCGCA TTTATTTATC GAGCGTAGTG GCCAAATCAC CCAATTGGTC AACTTTGAAA ACAGAGCTTG GCATGCTGGG CGATCAAGCT ATCTGGGCCG GCCTGAGTGC AACGATTACA GCATAGGTAT TGAGCTTGAA GGCTCAGATT TTCAGGCTTT CACCGCTGAG CAGTACACCG CCTTGTCCAG TGTAATCGCC GCTATTTATA AGGCTTATCC CAAAACACGC CGTCATTTAA CAGGCCACAG TGATATTGCC CCTGGGCGTA AAACGGATCC AGGAGAGTAT TTTGAATGGG ACACGCTGCG TGACTTAGTC AGCACCTTGG TGGCTAAGTA A
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Protein sequence | MKKPFIKARA SHKPIPLSIE SGLLTQADWL PSPNYNQRPE SCEISAIVIH NISLPPNEFG QTNKQGLHYV KALFTNTLDW DAHPYFKSIE GMEVSAHLFI ERSGQITQLV NFENRAWHAG RSSYLGRPEC NDYSIGIELE GSDFQAFTAE QYTALSSVIA AIYKAYPKTR RHLTGHSDIA PGRKTDPGEY FEWDTLRDLV STLVAK
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