Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0490 |
Symbol | fadE |
ID | 5206246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 583024 |
End bp | 585873 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598705 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001279395 |
Protein GI | 148652302 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTT TAACTTTAGT TGGCTTTTTT ATACTCGCCA TCTTATTGCA GCTGTTCGCT CTACTGCTGG TATTTTTGTA TGGGCTAAGC CGCACTGTTG GTGCCATTTT TCTTATTGTC ATTGCCGTGG TCAGTGCCTT TATCGCACCG TGGTCACTGT TATTGGGCGT GCCAATGATT ATCGGTAGCC TGTTGGTTCT TATCGCACCA CTGCGTCAGG CAGTGATTAG TAAGCCGGCT TATAAGATGC TGGCCGGCGC CATGCCTAGT ATGAGCGACA CCGAACGTGA GGCATTAGAT GCAGGTACCA GCTGGTGGGA AAAAGAGCTG TTTATGGGTG CGCCGGACTG GAATAAGTTT GCCAATTACC AGTACCCAAC GTTATCTGAA AAAGAACAAT CTTTTATTGA TAATGAAGTA GAAATACTGT GTAGCATGTT AGATGAATGG CAAATTCATC ATCATGATAA GGACCTATCA CCTCAAGCAT GGCAGTATAT TAAAGACAAT GGGTTTTTGG GGTTAATTAT CCCTGAAAGT TATGGCGGGC GTGAGTTTAC CCCTTATGCT CAAAGCCGTA TTATGAGTAA GATCGCCTCA CGCAGCTTAA CGGCTGCCGT TACGTGTATG GTGCCAAACT CATTGGGCCC AGGCGAGCTG TTGATGCACT ACGGTACTGA GGCGCAAAAG CAGCGCTGGC TACCAGGTCT GGCTAAAGGT ACTGAAATCC CTTGTTTTGG TCTGACCGGT CCTGAAGCTG GCTCAGATGC AGGTGCCATT CCTGATACCG GCGTAGTGTG CTACGGCATG TATGAAGGCC GTGAAGTGCT GGGCCTTAAC ATGAACTTCT CTAAGCGCTG GATTACCTTA GCCCCTGTGG CTACCGTAGT GGGTCTGGCC TTTAAACTGC ATGATCCAGA TGGCTTATTG GGTGATAAAA ACAAAACTGA TTACGGCATT ACGTGCGCCT TAATACCCGC CAATTATGAA GGTGTTCATA CCGGCGAGCG TCATAACCCA GGCTCACCAT TTATGAATGG TACTGTGGTC GGTAAAGATG TCTTTATTCC GCTAGACTTC ATTATTGGGG GAATAGAAAA TGCGGGTAGA GGCTGGCGTA TGCTGATGGA ATGTCTGGCT GTGGGCCGCG GTATCTCGTT GCCTGCCCTA TCGACTTCAG CCGGCGAGAT GAGCTATTTG ACGGTTGGTG CCTTTGCCAA AGTTCGTGAG CAATTCAAAA TATCTGTGGG TAAATTTGAG GGCGTACAAG ATGCCAGCAG TAACATCGCC AGCAATACCT ACATGCTAGA GTCATTCCGT CACTTGGTCA CCTGTGGCCT CAATGAAGGC GGCACGCCCT CAGTCATGAC TGCGATGGCC AAATACTATG CTACTGAGAC CATGCGCAAA ATAGTCAATG ATGGTATGGA CATTGTTGGT GGACGTGCTA TTCAGCTTGG CCCCCGTAAC TTCTTAGCAC TACCATATCA GGCCATACCG GTTTCTATCA CTGTCGAGGG TGCCAATATA TTGACCCGTT CATTGATGAT CTTCGGGCAA GGGGCCATGC GCTGCCATCC TTACTTATTT GAAGAGCTAC AACTGCTACA AAGTGAAGAC AAACGCTCAG CACAGCATAA ATTTGATGAC ATGTTCTTCA AACATTTAGG CTATACCTTT AACCGAGGTG CCCGCTCATT TGTGGCCGGT TATTTTGGCG GTAGCAGCAA AGCACCGAAA TTCGCTGACA GCTTTAGCCG TCCTTATTAC AAAAAAATTA ACCGTTTAAG TGCCAACTTT GCGCTGACTG CTGATATGGC ATTGGGACTT TTGGCTGGTG ACTTAAAACG CAAAGAGATG CTGTCTGGCC GCTTAGCAGA CATTCATGCC CATCTGTTTA TTATGACGGC CATTTTACGT TATTACGCCC AAGGCACTCA GTCAAAAGCA GAACAATTGC ACGCCCGCTT GGCACTAGAC AATGCGTTAT ATACCATTCA AGAAGCCTTC TTTGAATTAT ATGCCAACTT CCCAAATCGT ATGGCAGCCG GCTTGGTTAA ATTTGTCTGC TTCCCAGGCG GCGCTTTTGC CAGTAAGCCA AGTGATGCGC TCAAACGTGA GGTGGGCGAG CTGATGATGT TAGATGGCGA GCAAAACCCT TTCCGCGAGC AATTAAAAAG CTTGGTGTAT TACACCACAG ATCCGGACAA CAATACCGGC CGTATCGAAA ACGCATTCCA GATGCTACGC CACATAGAGC CATTATGGCA CAGCTTTAAA AAAGCGGAGA ACAAAGGCGA ATTTGCCGGT TTGACCTTTG AAGATCATGT GTTGACTGCC TTAAAAGATG GGGTTATCAC CGAGCATGAG TCTGAACAGC TGATTGAGTA TAACGCTGTG CGCTTTGATG CCCTGCTTAC AGACGTCTTT GATGAGCACT TAAATCATGC CTTACCCCGC TACAATCCGC ATACCTTAGA AAATGCGGCG CAGAATTTAA CGCCTTATGT GCTTGAAGCC ATTGAAAACC CTGCACAAGC TGCCTCAGAG CAGTCAGATT ATATAGAGGA CAGTGGCGAT CAAAATAGCG CGCATGGCTA TCAGCAAGAT GGAGAGGTTA AGCCAGTCTC TGAACAAACG CAGTTAGAGG AGCAGGTGGA TCAAGCCGAC TTTAATGAAG CCGACTTTAA TGAAGCAAAT GATCCTCGCC TGCGTGATGC TGAATTGACA TTAGAGCAGC GCATGGCCAA AAACCATGCT CGTCATCAAG CCAGCCTAGA GCAGGCCAAT AAGCAGACAG AGGGCGCTCA AAGCGATAGC TCAGACAATC CGCATCGCCC CAATAAGTAG
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Protein sequence | MTPLTLVGFF ILAILLQLFA LLLVFLYGLS RTVGAIFLIV IAVVSAFIAP WSLLLGVPMI IGSLLVLIAP LRQAVISKPA YKMLAGAMPS MSDTEREALD AGTSWWEKEL FMGAPDWNKF ANYQYPTLSE KEQSFIDNEV EILCSMLDEW QIHHHDKDLS PQAWQYIKDN GFLGLIIPES YGGREFTPYA QSRIMSKIAS RSLTAAVTCM VPNSLGPGEL LMHYGTEAQK QRWLPGLAKG TEIPCFGLTG PEAGSDAGAI PDTGVVCYGM YEGREVLGLN MNFSKRWITL APVATVVGLA FKLHDPDGLL GDKNKTDYGI TCALIPANYE GVHTGERHNP GSPFMNGTVV GKDVFIPLDF IIGGIENAGR GWRMLMECLA VGRGISLPAL STSAGEMSYL TVGAFAKVRE QFKISVGKFE GVQDASSNIA SNTYMLESFR HLVTCGLNEG GTPSVMTAMA KYYATETMRK IVNDGMDIVG GRAIQLGPRN FLALPYQAIP VSITVEGANI LTRSLMIFGQ GAMRCHPYLF EELQLLQSED KRSAQHKFDD MFFKHLGYTF NRGARSFVAG YFGGSSKAPK FADSFSRPYY KKINRLSANF ALTADMALGL LAGDLKRKEM LSGRLADIHA HLFIMTAILR YYAQGTQSKA EQLHARLALD NALYTIQEAF FELYANFPNR MAAGLVKFVC FPGGAFASKP SDALKREVGE LMMLDGEQNP FREQLKSLVY YTTDPDNNTG RIENAFQMLR HIEPLWHSFK KAENKGEFAG LTFEDHVLTA LKDGVITEHE SEQLIEYNAV RFDALLTDVF DEHLNHALPR YNPHTLENAA QNLTPYVLEA IENPAQAASE QSDYIEDSGD QNSAHGYQQD GEVKPVSEQT QLEEQVDQAD FNEADFNEAN DPRLRDAELT LEQRMAKNHA RHQASLEQAN KQTEGAQSDS SDNPHRPNK
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