Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0467 |
Symbol | |
ID | 5206901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 551141 |
End bp | 554983 |
Gene Length | 3843 bp |
Protein Length | 1280 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598682 |
Product | SMC domain-containing protein |
Protein accession | YP_001279372 |
Protein GI | 148652279 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTAA AATCTCTTAA ATTGTCCGGC TTTAAATCTT TTGCCAATCC AACCACTTTT AGCTTTCGCC ATGGCATTAC TGCCATTGTG GGGCCTAATG GCTGTGGTAA ATCTAATGTG ATTGATGCCA TCCGCTGGGT TTTGGGCGAG TCCTCTGCCA AGCAGCTGCG TGGTGGGGCA ATGAGTGATG TTATTTTTGC CGGTACTCAG AATAAAGCTG CCAAAAGTCT GGCCAGTGTT GAGCTAACCT TTGAGCATAC CCAAGATGAG CAGACTGGTA TTCGCCATGA GCTCAATTTA TATCATGAGC TGTCAGTGCG CCGCCAGATT AATGGGGAGG GTAAGTCGGA TTATTTTATC AATGGTACCC GATGCCGCCG CCGTGATGTG GTCGATGTAT TCTTAGGCAC AGGCTTGGGA CCACGCAGCT ACTCGGTGAT TCAGCAAGGG ATGATAGGGC GTATTGTCGA CTCAAGCCCG CTACAGTTGC GTGAGTTTAT TGAAGAGGCC GCGGGGGTGT CACGCTATCA GGCCCGCCGT GAAGAGACTC AAAAAAAGCT GCTTAGAACC CGAGAGAATT TAGAGCGCTT ACAAGACATT GAAGCTGAGC TGAGCCGTCA GAAGAAAAAG CTGGCCAAAC AAGCTGAGAG CGCCACCCAC TATCAGCAGT TGCAGCAGCA GCTAAGTGAA GTCAAAGAGC AGTTGGGCAC GCAGCAATTG TATCAGGCCA AAGCGGCACA AATGCAGCAC AAGGCTGAGC AAGAGCAGCT GACTAAGAGC CTTGAGGCGC AGCAAGCTCA GGACAGTATG CTTAAACAAA AGCTGGCCAA AGTCAGTGCG CGTCTGGCTG AGGAGCAGTG GCTAAAAGAT GAGGCGCGTG ATAGCCTGCA CCAACAAGAT TTACAGCGCC AGCAGGTTGA GCATCAACTC AAAGAGCTGC ACTCTAGCCT CAGTCAGCTG GAAGGGAAGT TACGTGCCAA TGCCGATCGG CAGCAAAAAA TACAGGCCAG TATGTTGGCC ACCGAGCAAG ACAATCAAGC ACAAAATGAG ACCTTGACCC AGTTAGCCCC TGAGCTTGAA GCCCTGCAAG TACAGCAGCA GCAAACGCAG GAAAAATATG CGCCGCTGCA GTCGGCTTGG GAGGCAAGCA ATACCAAAGT GGCTAAGATT GAGGCGGACA AACGAGAGGT TGAGCAGCGT CTTGCGCTTG CCAAACAGTC TGAATCTCGG CTCACGCTGG ATTTGTCCAA ATGGCACAAC AAAGATAAGC TATGGCAGCA AGAGGCAATA AAATGGGGAG TGCGCCCAAG CGGTGATACC CTTAGCGCTA CTGACGCAGA GGTGACATCA GCCCCAGTTT CGCAGCCATT AAATGAGCAG ATTGCTGGTA TCGATAACCA GCTTAAAGGC TTAGCTAAGC AGCAAGAGGT TATTGAAGAG CAGTTAGAGA CTAAGCAGCC AATTTTTAAT CAATTAAAGC AGACACAACA CCAGCAGCAA TCACAGCTTG CCCAGTTAGA AAAGCAGCAT GCCAGTCTGA TGGCAGAATA TGACACGTTG CATGCCATTG TTCACCCCAA AAAGCCGGCC AAGTTACCCT CAGCGCAGCC GACAGATGGC GCTCAATCCG TTATGGCTGA AGATAACAGT ACGGCTAACC GCTCTTTAGG ACACACGCTT GAGCAGCTCT CAGCATTACA CGAGCAGATT AAGCTGACCG CCGCTGGCGA GCCTTATGCC CAAAGCTTGG ATAAATGGTT GGCGTTTTGG CTGGATGCGG GGATACTACC GGCTACTGGC TTTGGCAACG ATAACGGCCA TGCAGGATTT ATTCAGTGTC TGCTGTCTGA TGACAGCTTT GATAAGTTTA GTAATAAGCC TCAAAGTAAA GCAGATAAAA GCGCTGCAAT GCCCCCTCAG AGTGTGTTAT TTGAGGGCAG TACTGCATCA GAGCATCAAC AGCAAGACTT GCCACCTGAT TTACAGCCCT ATTTAAAGCC TTTAACTGAG CTGATTGCTG CGCCCAAGCT TAGACTGTGG CAGCATACTT ATTTGTATGT GAAAGAGCAT AAGACAGATG AGGGCGCGAC AGACCTAGCA CTGGACTTAG ATAAAATCGC AGTGCTGCTG CACAGCATGC CTGCACCTAT AATAATATTA ACGCAATCAG GATGGCTAAT CACTCGAGTC GGCGCAGTGC ATATCAGTAA GCTTGATAAA AGTGGACAAC ATCCGTCATT TTTAAGCATT CGCTTGCAGC AACAACAGCG TCTAGCTGTA CTTGAGTCGC ATTTAAATGA GACAGAAACC CAGATTGAGC AGCTTACTAA CACCATAAAA GCACAGGCTC ATAAGCAAGA GCAGCTGTCT GTGGTTATTG AAGAGCTGTT GGCACAATTA TCTGCCTCAG CGCATAAGCG CCATGAACTA CAGCAACAAA GAATTACCTT GGTAGCCAAA CAAGAGCGGC AAGACAGCGA GCAGCAGCGC TTACAAGCAC AGCGAGATGA GCTGGATGCT GAACAGCAAG AAATCCAAAG CGCTCAGTTG GCATTAAGCC AAAAAATTGA ATCAGATAAT AAGCACTTAC AAGCCTTGAT GCCAGAATTA AAGGCGGCAA AACAGCAGCA GCAACAGCTA GAGTTAGAGC GCCAGCAAAT CAGTCAGCAA GAGCGTGACA ACAATGACAG CTTACGTCAA TTACAGTTGC AATACAGCCA AGCACAGATT GCTGTCAAGC ACAGTGCGGC GCAGTTACAG CAGTTTATTG AGGACAAGCA GCAGTTAGAG CGCAGTCAGC AAAAGCTTAT CCAAGAGCAA GATAAGCTGC AACAAAAGCT GCCACAATTA CAAGCCCAGC AACAAGCAGT CAGCCAGCAG CACCATGAGC TGAAAGTGGC CTTAGATGAG CGCCAAGCGG TAATTGGCAG CTTACAGAGT GACGTTGAGG CGCATCAAGC CCGCCGTGAT GACTTAGAAT CGCACATTCA GCAGCTACAA GATAAGTTAT CGCACAGCAT CACTCAAGTG GCCATTGCTG ATGAGCGTAT CAAAGAAGCC AGTGAGCGAT TAAAGGGGTT AAACACACAA ATTAGCCCCT TGGCTTTACT GACCGATTAT ATTACCCATG GGCGCAGTGT GTCAGCTGCC AAGCTAGAAA AACTGCAAGC GACAGAAAGT CAGCTAACGG CTAAGCTTAA TAACATGGGG CCGGTAAACT TAGCCGCCGC AGCCGAGCTG GCTGCTGTAG ATGAGCGTCT GCTTCCGCTT GAGCAGCAGA TTAATGACAT AACAGCCAGT ATGGATACTT TAAGTGAAGC CATTGCCTCT ATCGATGGCA AAACCAAAAC CTTGTTCTTA CAAACCTTAG ACTCGGTTAA TGAGTCACTC ACTCAGCTGT TTACCAAGGT GTTTGGTGGT GGTCAGGCCA GTTTAACCTT AATCAAGGAC GATGAATTGG GCGTAGGCGA GCAGTGGCGA GCAGGTCTTG AATTGATGGC GCAGCCCAAA GGTAAAAAGA ACAGCCGTTT GGCAGTATTG TCTGGTGGGG AGAAGACATT AACAGCGCTG AGCCTTATTT TTGCTATCTT TAAGCAGCAT CCTGCACCAT TTTGTGTGCT CGATGAGGTG GACGCACCGC TTGATGATGC TAACGTGGTG CGCTTTACCA ATTTGATTGC TGATTTAGCT GATGAGGTGC AGTTTATTTT TATCAGCCAC AATAAATTGG CAATGCAAAT CGCCGACGAG CTTAAAGGGG TGACCATGCC GCAAGCGGGT ATCTCAACGC TGGTGAGTGT CAGCCTAGAA GAGGCCGAGC AGTATTTAGA GCCTTCGGCT TAA
|
Protein sequence | MRLKSLKLSG FKSFANPTTF SFRHGITAIV GPNGCGKSNV IDAIRWVLGE SSAKQLRGGA MSDVIFAGTQ NKAAKSLASV ELTFEHTQDE QTGIRHELNL YHELSVRRQI NGEGKSDYFI NGTRCRRRDV VDVFLGTGLG PRSYSVIQQG MIGRIVDSSP LQLREFIEEA AGVSRYQARR EETQKKLLRT RENLERLQDI EAELSRQKKK LAKQAESATH YQQLQQQLSE VKEQLGTQQL YQAKAAQMQH KAEQEQLTKS LEAQQAQDSM LKQKLAKVSA RLAEEQWLKD EARDSLHQQD LQRQQVEHQL KELHSSLSQL EGKLRANADR QQKIQASMLA TEQDNQAQNE TLTQLAPELE ALQVQQQQTQ EKYAPLQSAW EASNTKVAKI EADKREVEQR LALAKQSESR LTLDLSKWHN KDKLWQQEAI KWGVRPSGDT LSATDAEVTS APVSQPLNEQ IAGIDNQLKG LAKQQEVIEE QLETKQPIFN QLKQTQHQQQ SQLAQLEKQH ASLMAEYDTL HAIVHPKKPA KLPSAQPTDG AQSVMAEDNS TANRSLGHTL EQLSALHEQI KLTAAGEPYA QSLDKWLAFW LDAGILPATG FGNDNGHAGF IQCLLSDDSF DKFSNKPQSK ADKSAAMPPQ SVLFEGSTAS EHQQQDLPPD LQPYLKPLTE LIAAPKLRLW QHTYLYVKEH KTDEGATDLA LDLDKIAVLL HSMPAPIIIL TQSGWLITRV GAVHISKLDK SGQHPSFLSI RLQQQQRLAV LESHLNETET QIEQLTNTIK AQAHKQEQLS VVIEELLAQL SASAHKRHEL QQQRITLVAK QERQDSEQQR LQAQRDELDA EQQEIQSAQL ALSQKIESDN KHLQALMPEL KAAKQQQQQL ELERQQISQQ ERDNNDSLRQ LQLQYSQAQI AVKHSAAQLQ QFIEDKQQLE RSQQKLIQEQ DKLQQKLPQL QAQQQAVSQQ HHELKVALDE RQAVIGSLQS DVEAHQARRD DLESHIQQLQ DKLSHSITQV AIADERIKEA SERLKGLNTQ ISPLALLTDY ITHGRSVSAA KLEKLQATES QLTAKLNNMG PVNLAAAAEL AAVDERLLPL EQQINDITAS MDTLSEAIAS IDGKTKTLFL QTLDSVNESL TQLFTKVFGG GQASLTLIKD DELGVGEQWR AGLELMAQPK GKKNSRLAVL SGGEKTLTAL SLIFAIFKQH PAPFCVLDEV DAPLDDANVV RFTNLIADLA DEVQFIFISH NKLAMQIADE LKGVTMPQAG ISTLVSVSLE EAEQYLEPSA
|
| |