Gene PsycPRwf_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0447 
SymbolrpsM 
ID5206077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp534035 
End bp534391 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID640598662 
Product30S ribosomal protein S13 
Protein accessionYP_001279352 
Protein GI148652259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000202005 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00280445 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGTA TTGCCGGCGT CAACATCCCG GATAACAAGC ATGCAGTGAT TTCATTGACT 
TATATTTTTG GTATTGGCCG TACTACCGCT AAGAAAATCT TAGACACGGT TGGCATTGCT
CCTACTACCA AAATCAGTCA ATTAGATGAC GCACAGCTTG ATGCTATCCG TGCAGAAGTT
GGTAACTACA TGACAGAGGG TGACCTACGT CGTGAAGTTT CAATGAATAT CAAGCGTTTG
GTCGATTTAG GTTGTTACCG TGGCATCCGC CATCGTCGTA ACTTACCTGT AAGAGGTCAA
AACACGAAGA ACAACGCTCG TACTCGTAAG GGTCCGATTC GTTCAATTAA AAGATAA
 
Protein sequence
MARIAGVNIP DNKHAVISLT YIFGIGRTTA KKILDTVGIA PTTKISQLDD AQLDAIRAEV 
GNYMTEGDLR REVSMNIKRL VDLGCYRGIR HRRNLPVRGQ NTKNNARTRK GPIRSIKR