| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0427 |
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| Symbol | rplD |
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| ID | 5206253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 523830 |
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| End bp | 524432 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640598642 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001279332 |
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| Protein GI | 148652239 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000154423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000614317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGAATTTAA AAACTGTTAC AGGCGCAGCG GTTGAGCTGT CTGACACGGC ATTTGGTCGT
GAATTCAACG AAGCCCTCGT TCACCAAGTC GTCACTGCTT ATTTAGCAGG CGCACGTCAA
GGTACCCGCG CACAAAAGAC TCGTGCTGAA GTTTCTGGCG GTGGTAAAAA ACCATGGCGT
CAAAAAGGTA CTGGCCGTGC ACGTGCTGGT TCTACTCGTA GCCCAATTTG GGTTGGTGGT
GGTCGAGCGT TTGCTGCCAA GCCACAAGAC TGGTCACAAA AAGTGAACCG TAAAATGTAT
CGCGGTGCGA TGCAGTGTAT CTTAGCTGAA TTAGTTCGCC AAGACCGTCT AATTTTAGTT
GACAGCATCA CTGTGTCAGC GCCAAAGACA AAAGAATTAA TTAGCAAATT GGCAGAACTT
AATGCACCAC GTGCATTAAT CGTGACCAAT GAAGTTGATG AGAATCTATA CTTAGCTGCC
CGCAACATTC CACATGTGAA TGTTCTAGGT ACTAACGAAG TGGATCCAGT TAGCTTGATT
GCGTTTGATA AAGTCATCAT GTCTGTTGAC GCAGCGAAAC AATTTGAGGA AGCACTAGCA
TGA
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| Protein sequence | MNLKTVTGAA VELSDTAFGR EFNEALVHQV VTAYLAGARQ GTRAQKTRAE VSGGGKKPWR
QKGTGRARAG STRSPIWVGG GRAFAAKPQD WSQKVNRKMY RGAMQCILAE LVRQDRLILV
DSITVSAPKT KELISKLAEL NAPRALIVTN EVDENLYLAA RNIPHVNVLG TNEVDPVSLI
AFDKVIMSVD AAKQFEEALA
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